RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 Q0VFX4 171 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 APH1AQ96BI3 265 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 POM121L2Q96KW2 1035 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 STRADBQ9C0K7 418 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 UBE2ZQ9H832 354 aaPredicted RBP6.58□□□□□ -1.36
VMA21-201ENST00000330374 FZR1Q9UM11 496 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 ADAMTS20P59510 1910 aa6.58□□□□□ -1.36
VMA21-201ENST00000330374 GPR179Q6PRD1 2367 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 LY6G6EA0A0G2JKS1 128 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 J3QT63 122 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 K7EN84 100 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 CLEC3BP05452 202 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 FOXL1Q12952 345 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 PSG7Q13046 419 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 ZNF645Q8N7E2 425 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 STARD4Q96DR4 205 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 HEATR1Q9H583 2144 aaKnown RBP6.57□□□□□ -1.36
VMA21-201ENST00000330374 GNB4Q9HAV0 340 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 MRPS18CQ9Y3D5 142 aaKnown RBP6.57□□□□□ -1.36
VMA21-201ENST00000330374 U3KQA8 63 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 MED13Q9UHV7 2174 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 LOC102723996A0A087X1L8 192 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 C15orf62A8K5M9 175 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 OR9G9P0C7N8 305 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 CYB561P49447 251 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 BRWD1-AS2P59051 145 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 COL5A1-AS1Q5SY13 56 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 PRAMEF5Q5TYX0 476 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 PRAMEF6Q5VXH4 476 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 STPG4Q8N801 248 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 OR2Y1Q8NGV0 311 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 RNASE7Q9H1E1 156 aaKnown RBP6.57□□□□□ -1.36
VMA21-201ENST00000330374 KCNIP2Q9NS61 270 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 ZNF586Q9NXT0 402 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 CEP250Q9BV73 2442 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 OR5B21A6NL26 309 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 FAM90A26D6RGX4 464 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 ZNF561-AS1K7EIQ3 104 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 FTH1P19P0C7X4 201 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 MGST1P10620 155 aaKnown RBP6.57□□□□□ -1.36
VMA21-201ENST00000330374 RNF151Q2KHN1 245 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 TEX43Q6ZNM6 134 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 NHLRC2Q8NBF2 726 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 ST6GALNAC3Q8NDV1 305 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 FAM122AQ96E09 287 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 RCHY1Q96PM5 261 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 SH2D2AQ9NP31 389 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 TRIOBPQ9H2D6 2365 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 ZNF318Q5VUA4 2279 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 HAND1O96004 215 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 PTTG1IPP53801 180 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 RANP62826 216 aaKnown RBP6.57□□□□□ -1.36
VMA21-201ENST00000330374 PAFAH1B2P68402 229 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 LCN12Q6JVE5 192 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 LINC00696Q6ZRV3 163 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 MMD2Q8IY49 270 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 OR4P4Q8NGL7 312 aa6.57□□□□□ -1.36
VMA21-201ENST00000330374 ZNF253O75346 499 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 IL6RP08887 468 aaPredicted RBP6.56□□□□□ -1.36
VMA21-201ENST00000330374 MAGEA5P43359 124 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 HNRNPA3P51991 378 aaKnown RBP6.56□□□□□ -1.36
VMA21-201ENST00000330374 UBE2NP61088 152 aaKnown RBP6.56□□□□□ -1.36
VMA21-201ENST00000330374 MDP1Q86V88 176 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 C20orf144Q9BQM9 153 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 RTL8AQ9BWD3 113 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 PARD6GQ9BYG4 376 aaPredicted RBP6.56□□□□□ -1.36
VMA21-201ENST00000330374 WIPI2Q9Y4P8 454 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 MPC1Q9Y5U8 109 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 DCHS1Q96JQ0 3298 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 TRBV6-6A0A0A6YYG2 114 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 A0A1W2PRX2 142 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 A8MXE2 369 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 YPEL1O60688 119 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 CA1P00915 261 aaPredicted RBP6.56□□□□□ -1.36
VMA21-201ENST00000330374 OR5G3P0C626 314 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 TMEM108Q6UXF1 575 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 TIPARPQ7Z3E1 657 aaKnown RBP6.56□□□□□ -1.36
VMA21-201ENST00000330374 KMT2EQ8IZD2 1858 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 OR4A16Q8NH70 328 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 YPEL2Q96QA6 119 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 PHF7Q9BWX1 381 aaPredicted RBP6.56□□□□□ -1.36
VMA21-201ENST00000330374 ZNF703Q9H7S9 590 aaPredicted RBP6.56□□□□□ -1.36
VMA21-201ENST00000330374 WDR54Q9H977 334 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 NRN1Q9NPD7 142 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 LOC400499M0QZD8 3231 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 TRAV3A0A0B4J244 114 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 CGAP01215 116 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 RPEL1Q2QD12 228 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 MOB1BQ7L9L4 216 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 SLC35E1Q96K37 410 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 IL36BQ9NZH7 164 aa6.56□□□□□ -1.36
VMA21-201ENST00000330374 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.55□□□□□ -1.36
VMA21-201ENST00000330374 C20orf202A1L168 122 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 SRIP30626 198 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 PLGLB1Q02325 96 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 UNQ5815/PRO19632Q6UWF5 114 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 TREML4Q6UXN2 200 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 LINC00596Q86U02 117 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 MGST2Q99735 147 aa6.55□□□□□ -1.36
VMA21-201ENST00000330374 WDR83OSQ9Y284 106 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms