RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SPIN2AQ99865 258 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 SPIN2BQ9BPZ2 258 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 MBD2Q9UBB5 411 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 TCF19Q9Y242 345 aa12.16□□□□□ -0.46
PRPF3-201ENST00000324862 FN1P02751 2386 aaKnown RBP12.15□□□□□ -0.46
PRPF3-201ENST00000324862 H3BP45 60 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 CHST1O43916 411 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 SNAPC5O75971 98 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 CA2P00918 260 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 PSMB6P28072 239 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 BPIFB3P59826 476 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 RPL8P62917 257 aaKnown RBP12.15□□□□□ -0.46
PRPF3-201ENST00000324862 NPBQ8NG41 125 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 OR10W1Q8NGF6 305 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 SLC25A33Q9BSK2 321 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 FAM103A1Q9BTL3 118 aaKnown RBP12.15□□□□□ -0.46
PRPF3-201ENST00000324862 TMEM14BQ9NUH8 114 aa12.15□□□□□ -0.46
PRPF3-201ENST00000324862 TET2Q6N021 2002 aaPredicted RBP12.15□□□□□ -0.47
PRPF3-201ENST00000324862 CGB1A6NKQ9 187 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 WRBO00258 174 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 NDUFA3O95167 84 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 IFNA17P01571 189 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 DYNLT3P51808 116 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 TNFRSF9Q07011 255 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 PRSS8Q16651 343 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 C5orf64Q2M2E5 130 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 THNSL2Q86YJ6 484 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 OR51B2Q9Y5P1 312 aa12.15□□□□□ -0.47
PRPF3-201ENST00000324862 FXYD6-FXYD2A0A087WZ82 144 aa12.14□□□□□ -0.47
PRPF3-201ENST00000324862 TEX50A0A1B0GTY4 177 aa12.14□□□□□ -0.47
PRPF3-201ENST00000324862 AMY1AP04745 511 aa12.14□□□□□ -0.47
PRPF3-201ENST00000324862 SLC25A6P12236 298 aa12.14□□□□□ -0.47
PRPF3-201ENST00000324862 TNXAQ16473 311 aa12.14□□□□□ -0.47
PRPF3-201ENST00000324862 Q6YL49 198 aa12.14□□□□□ -0.47
PRPF3-201ENST00000324862 TEX45Q8NA69 505 aa12.14□□□□□ -0.47
PRPF3-201ENST00000324862 RBKSQ9H477 322 aa12.14□□□□□ -0.47
PRPF3-201ENST00000324862 COA4Q9NYJ1 87 aa12.14□□□□□ -0.47
PRPF3-201ENST00000324862 NIPBLQ6KC79 2804 aaeCLIP12.14□□□□□ -0.47
PRPF3-201ENST00000324862 A6NDX4 124 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 LINC01548A6NM66 108 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 CYCSP99999 105 aaKnown RBP12.13□□□□□ -0.47
PRPF3-201ENST00000324862 NDPQ00604 133 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 Q6ZS46 218 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 C19orf35Q6ZS72 473 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 VSTM2AQ8TAG5 236 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 RNF5Q99942 180 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 HSPB9Q9BQS6 159 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 KIAA1456Q9P272 454 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 HSPB7Q9UBY9 170 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 HNRNPCP07910 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
PRPF3-201ENST00000324862 RBM14Q96PK6 669 aaKnown RBP12.13□□□□□ -0.47
PRPF3-201ENST00000324862 FOXA2Q9Y261 457 aaPredicted RBP12.13□□□□□ -0.47
PRPF3-201ENST00000324862 POMT1Q9Y6A1 747 aa12.13□□□□□ -0.47
PRPF3-201ENST00000324862 PAX9P55771 341 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 BLCAPP62952 87 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 ZFP69Q49AA0 526 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 COMMD5Q9GZQ3 224 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 MSGN1A6NI15 193 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 SYNGR2O43760 224 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 DEDDO75618 318 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 ZNF429Q86V71 674 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 C5orf56Q8N8D9 126 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 AIFM2Q9BRQ8 373 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 FBXO7Q9Y3I1 522 aa12.12□□□□□ -0.47
PRPF3-201ENST00000324862 PIGBOS1A0A0B4J2F0 54 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 ARPC5O15511 151 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 C1QBP02746 253 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 REG1AP05451 166 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 AP2S1P53680 142 aaPredicted RBP12.11□□□□□ -0.47
PRPF3-201ENST00000324862 HSPE1P61604 102 aaKnown RBP12.11□□□□□ -0.47
PRPF3-201ENST00000324862 AARDQ4LEZ3 155 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 DCUN1D4Q92564 292 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 PRNDQ9UKY0 176 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 SPDEFO95238 335 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 FOSL1P15407 271 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 HNF1AP20823 631 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 CX3CL1P78423 397 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 C11orf1Q9H5F2 150 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 ESM1Q9NQ30 184 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 BOLA1Q9Y3E2 137 aa12.11□□□□□ -0.47
PRPF3-201ENST00000324862 SRD5A1P18405 259 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 PRSS54Q6PEW0 395 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 NOXA1Q86UR1 476 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 MMD2Q8IY49 270 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 OR4A5Q8NH83 315 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 THAP6Q8TBB0 222 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 DTD1Q8TEA8 209 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 NDUFA4L2Q9NRX3 87 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 LINC00527Q9UJ94 153 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 IGHV7-81A0A0B4J1V7 117 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 FAM24AA6NFZ4 105 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 ACTL6BO94805 426 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 CNIH1O95406 144 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 COMPP49747 757 aaPredicted RBP12.1□□□□□ -0.47
PRPF3-201ENST00000324862 WT1-ASQ06250 92 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 C9orf152Q5JTZ5 239 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 SRSF12Q8WXF0 261 aaKnown RBP12.1□□□□□ -0.47
PRPF3-201ENST00000324862 RASL11BQ9BPW5 248 aa12.1□□□□□ -0.47
PRPF3-201ENST00000324862 PRDM13Q9H4Q3 707 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms