RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 NPIPB13A6NJU9 1138 aa8.41□□□□□ -1.06
COL12A1-201ENST00000322507 NPIPB4C9JG80 1138 aa8.41□□□□□ -1.06
COL12A1-201ENST00000322507 SHISA5Q8N114 240 aa8.41□□□□□ -1.06
COL12A1-201ENST00000322507 IL36RNQ9UBH0 155 aa8.41□□□□□ -1.06
COL12A1-201ENST00000322507 CA7P43166 264 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 KLK2P20151 261 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 ZIC1Q15915 447 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 PATE1Q8WXA2 126 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 LYZP61626 148 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 SPATA46Q5T0L3 261 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 PQLC2Q6ZP29 291 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 CCL27Q9Y4X3 112 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 A8MXK9 166 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 IGHG4P01861 327 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 NHLRC3Q5JS37 347 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 CCL4L1Q8NHW4 92 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 PLXNB1O43157 2135 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 SUMO2P61956 95 aaKnown RBP8.4□□□□□ -1.06
COL12A1-201ENST00000322507 TMEM177Q53S58 311 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 TMPRSS2O15393 492 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 GNG5P63218 68 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 HOGA1Q86XE5 327 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 MRM2Q9UI43 246 aaKnown RBP8.4□□□□□ -1.06
COL12A1-201ENST00000322507 ZSWIM8A7E2V4 1837 aa8.4□□□□□ -1.06
COL12A1-201ENST00000322507 TRAV12-3A0A0B4J271 114 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 GAGE12HA6NDE8 117 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 WNT9BO14905 357 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 DUX5Q96PT3 197 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 OR2A4O95047 310 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 GUCA2AQ02747 115 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 DUX4L9Q6RFH8 374 aaPredicted RBP8.4□□□□□ -1.07
COL12A1-201ENST00000322507 OR2A7Q96R45 310 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 PAXXQ9BUH6 204 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 LHX9Q9NQ69 397 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 KLHDC2Q9Y2U9 406 aa8.4□□□□□ -1.07
COL12A1-201ENST00000322507 CISD3P0C7P0 127 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 ZNF83P51522 516 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 KRTCAP3Q53RY4 240 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 RNF7Q9UBF6 113 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 INSIG2Q9Y5U4 225 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 MSRB3Q8IXL7 192 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 OR11H7Q8NGC8 314 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 PLAURQ03405 335 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 MDP1Q86V88 176 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 DEFB123Q8N688 67 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 LRTM2Q8N967 370 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 AGRNO00468 2067 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 ASAH2BP0C7U1 165 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 NXPH1P58417 271 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 KLF9Q13886 244 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-201ENST00000322507 SS18L1O75177 396 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-201ENST00000322507 SAXO1Q8IYX7 474 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 CENPVQ7Z7K6 275 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-201ENST00000322507 ZP4Q12836 540 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 SP6Q3SY56 376 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 WDYHV1Q96HA8 205 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 FBXL15Q9H469 300 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 NPVFQ9HCQ7 196 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 TNFRSF12AQ9NP84 129 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 PRSS36Q5K4E3 855 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 TMEM170BQ5T4T1 132 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 SCNM1Q9BWG6 230 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 ARRDC1-AS1Q9H2J1 176 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 SIPA1L1O43166 1804 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 PSG1P11464 419 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 FBXW9Q5XUX1 488 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 PRNTQ86SH4 94 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 C16orf92Q96LL3 132 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 SFXN3Q9BWM7 321 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 CTGFP29279 349 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 RASL10BQ96S79 203 aa8.39□□□□□ -1.07
COL12A1-201ENST00000322507 NYNRINQ9P2P1 1898 aaKnown RBP8.38□□□□□ -1.07
COL12A1-201ENST00000322507 A0A1W2PRF3 423 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 A0A1W2PRM7 423 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 RPL36A-HNRNPH2H7BZ11 118 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 ZNHIT1O43257 154 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 SNRPCP09234 159 aaKnown RBP8.38□□□□□ -1.07
COL12A1-201ENST00000322507 COL10A1Q03692 680 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 OTPQ5XKR4 325 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 OR2H1Q9GZK4 316 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 COA4Q9NYJ1 87 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 DENND4AQ7Z401 1863 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 C1orf210Q8IVY1 113 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 OR9G1Q8NH87 305 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 ADAMTSL1Q8N6G6 1762 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 NKG7Q16617 165 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 METTL26Q96S19 204 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 CSTL1Q9H114 145 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 C2CD4DB7Z1M9 353 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 SELLP14151 372 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 CCL17Q92583 94 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 PSG9Q00887 426 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 FAM27BQ5VT28 67 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 LILRA6Q6PI73 481 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 RNF125Q96EQ8 232 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 HIGD1AQ9Y241 93 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 PXMP4Q9Y6I8 212 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 ATP5G1P05496 136 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 ATP5G3P48201 142 aa8.38□□□□□ -1.07
COL12A1-201ENST00000322507 ATP5G2Q06055 141 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms