RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TGOLN2O43493 480 aa14.33□□□□□ -0.11
COL9A1-201ENST00000320755 RNF7Q9UBF6 113 aa14.33□□□□□ -0.11
COL9A1-201ENST00000320755 KBTBD11-OT1A0A1B0GTJ5 212 aa14.33□□□□□ -0.12
COL9A1-201ENST00000320755 SELENOVP59797 346 aa14.33□□□□□ -0.12
COL9A1-201ENST00000320755 LINC01551Q86U37 167 aa14.33□□□□□ -0.12
COL9A1-201ENST00000320755 RND1Q92730 232 aa14.33□□□□□ -0.12
COL9A1-201ENST00000320755 SEPSECSQ9HD40 501 aaKnown RBP14.33□□□□□ -0.12
COL9A1-201ENST00000320755 NDUFB7P17568 137 aa14.33□□□□□ -0.12
COL9A1-201ENST00000320755 ARSJQ5FYB0 599 aaPredicted RBP14.33□□□□□ -0.12
COL9A1-201ENST00000320755 WFIKKN1Q96NZ8 548 aa14.33□□□□□ -0.12
COL9A1-201ENST00000320755 KALRNO60229 2985 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 CA2P00918 260 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 LHBP01229 141 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 NPY1RP25929 384 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 MOB3BQ86TA1 216 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 SCO2A0A1W2PP80 73 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 FOXH1O75593 365 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 OPRK1P41145 380 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 ANAPC16Q96DE5 110 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 NPVFQ9HCQ7 196 aa14.32□□□□□ -0.12
COL9A1-201ENST00000320755 A0A1B0GWJ7 208 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 ZNF320A2RRD8 509 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 RBFOX2O43251 390 aaKnown RBP eCLIP14.31□□□□□ -0.12
COL9A1-201ENST00000320755 IGHV1-46P01743 117 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 CFHR2P36980 270 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 THBS3P49746 956 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 RAB7AP51149 207 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 PAX5Q02548 391 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 C1orf174Q8IYL3 243 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 SLC24A4Q8NFF2 622 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 DDB2Q92466 427 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 C15orf61A6NNL5 157 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 TMPRSS2O15393 492 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 PDE6DO43924 150 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 IGKV1-16P04430 117 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 IL6RP08887 468 aaPredicted RBP14.31□□□□□ -0.12
COL9A1-201ENST00000320755 OR1P1Q8NH06 330 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 C1orf159Q96HA4 380 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 DIRC2Q96SL1 478 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 PYGO2Q9BRQ0 406 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 CEP295Q9C0D2 2601 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 SPTA1P02549 2419 aa14.31□□□□□ -0.12
COL9A1-201ENST00000320755 TMEM183AQ8IXX5 376 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 STPG3Q8N7X2 389 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 LRFN3Q9BTN0 628 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 PRDM13Q9H4Q3 707 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 TRBV20OR9-2A0A075B6H5 130 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 PRSS46E5RG02 174 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 MPDU1O75352 247 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 CGB3P0DN86 165 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 CGB7P0DN87 165 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 HIST1H1BP16401 226 aaKnown RBP14.3□□□□□ -0.12
COL9A1-201ENST00000320755 IGFBP2P18065 325 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 GATA2P23769 480 aaPredicted RBP14.3□□□□□ -0.12
COL9A1-201ENST00000320755 HSPE1P61604 102 aaKnown RBP14.3□□□□□ -0.12
COL9A1-201ENST00000320755 C1orf185Q5T7R7 199 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 TEPPQ6URK8 271 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 OR52E5Q8NH55 327 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 ABCA1O95477 2261 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 DYSFO75923 2080 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 PLXNB1O43157 2135 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 NBASA2RRP1 2371 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 CR1LQ2VPA4 569 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 KCNIP4Q6PIL6 250 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 FAM169BQ8N8A8 192 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 OR4P4Q8NGL7 312 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 KCNIP2Q9NS61 270 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 TP53TG5Q9Y2B4 290 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 YTHDF2Q9Y5A9 579 aaKnown RBP14.3□□□□□ -0.12
COL9A1-201ENST00000320755 OR51B2Q9Y5P1 312 aa14.3□□□□□ -0.12
COL9A1-201ENST00000320755 DSCAML1Q8TD84 2053 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 VENTXO95231 258 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 AMBPP02760 352 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 IDI2-AS1Q9NZ38 188 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 FAM90A9PA6NNJ1 464 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 CXorf1O96002 111 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 STAG3L2P0CL84 134 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 STAG3L3P0CL85 134 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 NUBP1P53384 320 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 EFNB3Q15768 340 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 MLANAQ16655 118 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 AARDQ4LEZ3 155 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 TCF23Q7RTU1 214 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 SGMS2Q8NHU3 365 aa14.29□□□□□ -0.12
COL9A1-201ENST00000320755 ZCCHC14Q8WYQ9 949 aaKnown RBP14.29□□□□□ -0.12
COL9A1-201ENST00000320755 F6UZH7 168 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 KLK10O43240 276 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 IL3RAP26951 378 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 KIR2DS2P43631 304 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 REG1BP48304 166 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 WFDC8Q8IUA0 241 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 GAFA1Q96PS6 74 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 IGLV3-9A0A075B6K5 115 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 ZNF729A6NN14 1252 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-201ENST00000320755 SRRM4A7MD48 611 aaKnown RBP14.28□□□□□ -0.12
COL9A1-201ENST00000320755 ZNF705GA8MUZ8 300 aaPredicted RBP14.28□□□□□ -0.12
COL9A1-201ENST00000320755 J3QR06 171 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 IRF2P14316 349 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 FAM216AQ8WUB2 273 aa14.28□□□□□ -0.12
COL9A1-201ENST00000320755 A0A1B0GUS0 222 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms