RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 SMIM10L1P0DMW3 83 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 NDPQ00604 133 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 SMIM10Q96HG1 83 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 DPH3P1Q9H4G8 78 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 COL5A1-AS1Q5SY13 56 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 LCNL1Q6ZST4 164 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 OR5P3Q8WZ94 311 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 SPSB4Q96A44 273 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 UMODP07911 640 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 RAG2P55895 527 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 MEF2BQ02080 365 aaPredicted RBP7.44□□□□□ -1.22
SSBP2-201ENST00000320672 PNRC1Q12796 327 aaPredicted RBP7.44□□□□□ -1.22
SSBP2-201ENST00000320672 PARD6GQ9BYG4 376 aaPredicted RBP7.44□□□□□ -1.22
SSBP2-201ENST00000320672 LYRM2Q9NU23 88 aaPredicted RBP7.44□□□□□ -1.22
SSBP2-201ENST00000320672 SCN1AP35498 2009 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 ADAMTS7Q9UKP4 1686 aa7.44□□□□□ -1.22
SSBP2-201ENST00000320672 A6NNC1 897 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 APOHP02749 345 aaPredicted RBP7.43□□□□□ -1.22
SSBP2-201ENST00000320672 MLANAQ16655 118 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 MRPL13Q9BYD1 178 aaKnown RBP7.43□□□□□ -1.22
SSBP2-201ENST00000320672 ELOA3CA0A087WX78 387 aaPredicted RBP7.43□□□□□ -1.22
SSBP2-201ENST00000320672 NPFFO15130 113 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 ZNF329Q86UD4 541 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 METRNQ9UJH8 293 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 MAST2Q6P0Q8 1798 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 BCORQ6W2J9 1755 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 A8MWL6 223 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 IGHV4-39P01824 125 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 SPATA31B1PQ5VZV4 182 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 AHRRA9YTQ3 701 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 MLNRO43193 412 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 MPDU1O75352 247 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 PKIAP61925 76 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 ZNF273Q14593 569 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 MDC1Q14676 2089 aaKnown RBP7.43□□□□□ -1.22
SSBP2-201ENST00000320672 CYP2G1PQ6ZSU1 146 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 H1FOOQ8IZA3 346 aaPredicted RBP7.43□□□□□ -1.22
SSBP2-201ENST00000320672 TEX45Q8NA69 505 aa7.43□□□□□ -1.22
SSBP2-201ENST00000320672 SFTPCP11686 197 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 STARD6P59095 220 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 C1orf53Q5VUE5 145 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 FAM159AQ6UWV7 190 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 COLCA1Q6ZS62 124 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 LILRA1O75019 489 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 FOXH1O75593 365 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 UCP3P55916 312 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 UNQ9370/PRO34162Q6UXP9 181 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 OR5AN1Q8NGI8 311 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 RAX2Q96IS3 184 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 RTBDNQ9BSG5 229 aaPredicted RBP7.42□□□□□ -1.22
SSBP2-201ENST00000320672 MAP1LC3AQ9H492 121 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 NPIPB11E5RHQ5 1161 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 ACP7Q6ZNF0 438 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 SFRP2Q96HF1 295 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 CD1AP06126 327 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 ZNF415Q09FC8 603 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 CCDC144NLQ6NUI1 221 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 PAQR4Q8N4S7 273 aaPredicted RBP7.42□□□□□ -1.22
SSBP2-201ENST00000320672 TMEM54Q969K7 222 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 CEACAM4O75871 244 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 COTL1Q14019 142 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 FAM106AQ4KMX7 169 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 ZNF324BQ6AW86 544 aaPredicted RBP7.42□□□□□ -1.22
SSBP2-201ENST00000320672 GCSAMQ8N6F7 178 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 ZNF703Q9H7S9 590 aaPredicted RBP7.42□□□□□ -1.22
SSBP2-201ENST00000320672 PLSCR2Q9NRY7 297 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 LINC00614P0C842 121 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 SRSF7Q16629 238 aaKnown RBP eCLIP7.42□□□□□ -1.22
SSBP2-201ENST00000320672 POC1AQ8NBT0 407 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 LHFPL5Q8TAF8 219 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 SPRR3Q9UBC9 169 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 SOX21Q9Y651 276 aaPredicted RBP7.42□□□□□ -1.22
SSBP2-201ENST00000320672 A0A0B4J293 547 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 PPP1R27Q86WC6 154 aa7.42□□□□□ -1.22
SSBP2-201ENST00000320672 SYNGR3O43761 229 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 TSPAN7P41732 249 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 MOB4Q9Y3A3 225 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 OR9G1Q8NH87 305 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 GALNT14Q96FL9 552 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 GDF15Q99988 308 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 TMEM14DPA8MWL7 114 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 RPL35AP18077 110 aaKnown RBP7.41□□□□□ -1.22
SSBP2-201ENST00000320672 DEFB121Q5J5C9 76 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 VAX1Q5SQQ9 334 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 IGHV2OR16-5A0A0B4J2B6 119 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 NCR2O95944 276 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 LIPFP07098 398 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 GEMIN7Q9H840 131 aaKnown RBP7.41□□□□□ -1.22
SSBP2-201ENST00000320672 NHSQ6T4R5 1651 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 SCAND1P57086 179 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 CFHR1Q03591 330 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 NPFFR1Q9GZQ6 430 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 KNTC1P50748 2209 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 A0A0A6YYD4 124 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 CSRP3P50461 194 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 WFDC1Q9HC57 220 aa7.41□□□□□ -1.22
SSBP2-201ENST00000320672 ZNF107Q9UII5 783 aaPredicted RBP7.41□□□□□ -1.22
SSBP2-201ENST00000320672 TRAV14DV4A0A0A6YYC5 116 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 F8VVB4 439 aa7.4□□□□□ -1.22
SSBP2-201ENST00000320672 F8VWA3 439 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms