RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 CHST1O43916 411 aa10.81□□□□□ -0.68
PRPF18-201ENST00000320054 HLA-DRB1P01911 266 aa10.81□□□□□ -0.68
PRPF18-201ENST00000320054 RAP2BP61225 183 aa10.81□□□□□ -0.68
PRPF18-201ENST00000320054 ID3Q02535 119 aa10.81□□□□□ -0.68
PRPF18-201ENST00000320054 PJVKQ0ZLH3 352 aa10.81□□□□□ -0.68
PRPF18-201ENST00000320054 PDLIM3Q53GG5 364 aaPredicted RBP10.81□□□□□ -0.68
PRPF18-201ENST00000320054 OR5B3Q8NH48 314 aa10.81□□□□□ -0.68
PRPF18-201ENST00000320054 OR52E5Q8NH55 327 aa10.81□□□□□ -0.68
PRPF18-201ENST00000320054 QTRT1Q9BXR0 403 aaKnown RBP10.81□□□□□ -0.68
PRPF18-201ENST00000320054 GSKIPQ9P0R6 139 aa10.81□□□□□ -0.68
PRPF18-201ENST00000320054 HSPB7Q9UBY9 170 aa10.81□□□□□ -0.68
PRPF18-201ENST00000320054 DNAJC9-AS1A6NH13 148 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 FCN1O00602 326 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 ST8SIA3O43173 380 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 RBMXL2O75526 392 aaKnown RBP10.8□□□□□ -0.68
PRPF18-201ENST00000320054 ACTL6BO94805 426 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 CA2P00918 260 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 AMY1AP04745 511 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 NKX2-1P43699 371 aaPredicted RBP10.8□□□□□ -0.68
PRPF18-201ENST00000320054 COMPP49747 757 aaPredicted RBP10.8□□□□□ -0.68
PRPF18-201ENST00000320054 OR2B8PP59922 312 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 HILS1P60008 231 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 SPCS3P61009 180 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 HSPE1P61604 102 aaKnown RBP10.8□□□□□ -0.68
PRPF18-201ENST00000320054 ZNF562Q6V9R5 426 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 OR1L8Q8NGR8 309 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 JMJD8Q96S16 334 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 CHIAQ9BZP6 476 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 COMMD5Q9GZQ3 224 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 ZFP57Q9NU63 452 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 OR51B2Q9Y5P1 312 aa10.8□□□□□ -0.68
PRPF18-201ENST00000320054 TEP1Q99973 2627 aaKnown RBP10.79□□□□□ -0.68
PRPF18-201ENST00000320054 TEX50A0A1B0GTY4 177 aa10.79□□□□□ -0.68
PRPF18-201ENST00000320054 MED6O75586 246 aa10.79□□□□□ -0.68
PRPF18-201ENST00000320054 CCNKO75909 580 aa10.79□□□□□ -0.68
PRPF18-201ENST00000320054 SSBP2P81877 361 aaPredicted RBP10.79□□□□□ -0.68
PRPF18-201ENST00000320054 CD83Q01151 205 aa10.79□□□□□ -0.68
PRPF18-201ENST00000320054 TNFRSF9Q07011 255 aa10.79□□□□□ -0.68
PRPF18-201ENST00000320054 CXorf66Q5JRM2 361 aaPredicted RBP10.79□□□□□ -0.68
PRPF18-201ENST00000320054 AKAP14Q86UN6 197 aa10.79□□□□□ -0.68
PRPF18-201ENST00000320054 WDR89Q96FK6 387 aaPredicted RBP10.79□□□□□ -0.68
PRPF18-201ENST00000320054 ST6GAL2Q96JF0 529 aa10.79□□□□□ -0.68
PRPF18-201ENST00000320054 CLCC1Q96S66 551 aa10.79□□□□□ -0.68
PRPF18-201ENST00000320054 ESM1Q9NQ30 184 aa10.79□□□□□ -0.68
PRPF18-201ENST00000320054 IGHV7-81A0A0B4J1V7 117 aa10.78□□□□□ -0.68
PRPF18-201ENST00000320054 GPR137BO60478 399 aa10.78□□□□□ -0.68
PRPF18-201ENST00000320054 IFNA17P01571 189 aa10.78□□□□□ -0.68
PRPF18-201ENST00000320054 MBPP02686 304 aaPredicted RBP10.78□□□□□ -0.68
PRPF18-201ENST00000320054 RPL27AP46776 148 aaKnown RBP10.78□□□□□ -0.68
PRPF18-201ENST00000320054 RPL15P61313 204 aaKnown RBP10.78□□□□□ -0.68
PRPF18-201ENST00000320054 CX3CL1P78423 397 aa10.78□□□□□ -0.68
PRPF18-201ENST00000320054 PRCDQ00LT1 54 aa10.78□□□□□ -0.68
PRPF18-201ENST00000320054 TNXAQ16473 311 aa10.78□□□□□ -0.68
PRPF18-201ENST00000320054 PPP1R1CQ8WVI7 109 aa10.78□□□□□ -0.68
PRPF18-201ENST00000320054 RANGRFQ9HD47 186 aaPredicted RBP10.78□□□□□ -0.68
PRPF18-201ENST00000320054 NDUFA4L2Q9NRX3 87 aa10.78□□□□□ -0.68
PRPF18-201ENST00000320054 TNFRSF19Q9NS68 423 aa10.78□□□□□ -0.68
PRPF18-201ENST00000320054 NF1P21359 2839 aa10.77□□□□□ -0.68
PRPF18-201ENST00000320054 CGB1A6NKQ9 187 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 INS-IGF2F8WCM5 200 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 K7EPK0 472 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 SYNGR2O43760 224 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 CNIH1O95406 144 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 LY86O95711 162 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 SCGB1D2O95969 90 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.69
PRPF18-201ENST00000320054 MYOD1P15172 320 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 PSMB6P28072 239 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 GNB1P62873 340 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 FGL1Q08830 312 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 RAB32Q13637 225 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 FXYD3Q14802 87 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 TCTE3Q8IZS6 198 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 SRSF12Q8WXF0 261 aaKnown RBP10.77□□□□□ -0.69
PRPF18-201ENST00000320054 NEURL2Q9BR09 285 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 SRSF8Q9BRL6 282 aaKnown RBP10.77□□□□□ -0.69
PRPF18-201ENST00000320054 RBKSQ9H477 322 aa10.77□□□□□ -0.69
PRPF18-201ENST00000320054 NIPBLQ6KC79 2804 aaeCLIP10.77□□□□□ -0.69
PRPF18-201ENST00000320054 A0A1W2PN81 502 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 WRBO00258 174 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 KCNAB3O43448 404 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 MPC2O95563 127 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 IGHG2P01859 326 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 PET100P0DJ07 73 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 CHRNA7P36544 502 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 C10orf55Q5SWW7 151 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 HSD17B13Q7Z5P4 300 aaPredicted RBP10.76□□□□□ -0.69
PRPF18-201ENST00000320054 MRPL41Q8IXM3 137 aaKnown RBP10.76□□□□□ -0.69
PRPF18-201ENST00000320054 OR2T35Q8NGX2 323 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 ARPC1AQ92747 370 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 DUX5Q96PT3 197 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 CIB3Q96Q77 187 aaPredicted RBP10.76□□□□□ -0.69
PRPF18-201ENST00000320054 RAB40CQ96S21 281 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 HSPB9Q9BQS6 159 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 PRSS22Q9GZN4 317 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 NPFFR1Q9GZQ6 430 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 MAGT1Q9H0U3 335 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 ZNF580Q9UK33 172 aa10.76□□□□□ -0.69
PRPF18-201ENST00000320054 RCL1Q9Y2P8 373 aaKnown RBP10.76□□□□□ -0.69
PRPF18-201ENST00000320054 A0A1B0GW64 132 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms