RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 MEF2CQ06413 473 aaPredicted RBP7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 NCMAPQ5T1S8 102 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 TEPPQ6URK8 271 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 NUP37Q8NFH4 326 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 OR4P4Q8NGL7 312 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 NEU4Q8WWR8 484 aaPredicted RBP7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 YPEL2Q96QA6 119 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 CABLES2Q9BTV7 478 aa7.73□□□□□ -1.17
TMEM39A-201ENST00000319172 ZNF273Q14593 569 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 CCDC144NLQ6NUI1 221 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 OR1B1Q8NGR6 318 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 BLNKQ8WV28 456 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 TAF15Q92804 592 aaKnown RBP eCLIP7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 SSBP3Q9BWW4 388 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 PARP11Q9NR21 331 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 GAB2Q9UQC2 676 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 SH2D7A6NKC9 451 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 FAM90A26D6RGX4 464 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 CGAP01215 116 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 ETFRF1Q6IPR1 90 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 DUX4L9Q6RFH8 374 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 CD24P25063 80 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 PCP4P48539 62 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 OR4A47Q6IF82 309 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 PRR27Q6MZM9 219 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 LYPD2Q6UXB3 125 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 C15orf54Q8N8G6 183 aa7.72□□□□□ -1.17
TMEM39A-201ENST00000319172 HAX1O00165 279 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 OR10J1P30954 320 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 SCGB2A2Q13296 93 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 MIC13Q5XKP0 118 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 KCNIP4Q6PIL6 250 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 LYPD6Q86Y78 171 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 SMIM8Q96KF7 97 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 PIMREGQ9BSJ6 248 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 TMEM204Q9BSN7 226 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 NDFIP1Q9BT67 221 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 TMEM208Q9BTX3 173 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 NPVFQ9HCQ7 196 aa7.71□□□□□ -1.17
TMEM39A-201ENST00000319172 TRBV23-1A0A0A0MS06 115 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 GNG7O60262 68 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 COL8A2P25067 703 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 DUTP33316 252 aaKnown RBP7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 TIGITQ495A1 244 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 MMD2Q8IY49 270 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 C2CD4CQ8TF44 421 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 TIMM9Q9Y5J7 89 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 TLN2Q9Y4G6 2542 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 COL4A2P08572 1712 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 DNASE2O00115 360 aaPredicted RBP7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 SLC31A2O15432 143 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 PAGE4O60829 102 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 THBDP07204 575 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 PDLIM4P50479 330 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 TMEM41BQ5BJD5 291 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 PCSK4Q6UW60 755 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 TXN2Q99757 166 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 GAMTQ14353 236 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 PSG5Q15238 335 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 DNM1P46Q6ZS02 220 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 OR4X1Q8NH49 305 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 GAFA1Q96PS6 74 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 FBXL15Q9H469 300 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 PXMP4Q9Y6I8 212 aa7.71□□□□□ -1.18
TMEM39A-201ENST00000319172 HIVEP2P31629 2446 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 USF1P22415 310 aaPredicted RBP7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 UBE2L3P68036 154 aaKnown RBP7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 DHRS7BQ6IAN0 325 aaPredicted RBP7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 Q8NA96 180 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 RPUSD1Q9UJJ7 312 aaKnown RBP7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 SLC45A2Q9UMX9 530 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 ERVK11-1P61568 191 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 TMEM30BQ3MIR4 351 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 TMEM200BQ69YZ2 307 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNRD1Q9P1U0 126 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 A0A1W2PPQ1 181 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 CD55P08174 381 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 S100A4P26447 101 aaKnown RBP7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 UQCRFS1P47985 274 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 SERF2P84101 59 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 SRSF7Q16629 238 aaKnown RBP eCLIP7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 CBLN2Q8IUK8 224 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 SAMD10Q9BYL1 202 aa7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 AURKAIP1Q9NWT8 199 aaPredicted RBP7.7□□□□□ -1.18
TMEM39A-201ENST00000319172 CTXND1A0A1B0GTU2 59 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 RND2P52198 227 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 ID3Q02535 119 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 LY6EQ16553 131 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNF788Q6ZQV5 615 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 SSC4DQ8WTU2 575 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 ISOC2Q96AB3 205 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 DPM3Q9P2X0 92 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 ARFGEF3Q5TH69 2177 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 TRBV6-6A0A0A6YYG2 114 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 C11orf94C9JXX5 98 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 CA2P00918 260 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 TGFAP01135 160 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 SLC35E3Q7Z769 313 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 LRTM2Q8N967 370 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 TCEAL7Q9BRU2 100 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms