RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 BSPH1Q075Z2 132 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 ZNF114Q8NC26 417 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 OR2Z1Q8NG97 314 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 CLN8Q9UBY8 286 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 TRAPPC1Q9Y5R8 145 aa13.16□□□□□ -0.3
USH1C-202ENST00000318024 USF3Q68DE3 2245 aa13.15□□□□□ -0.3
USH1C-202ENST00000318024 ODAMA1E959 279 aa13.15□□□□□ -0.3
USH1C-202ENST00000318024 J3QT63 122 aa13.15□□□□□ -0.3
USH1C-202ENST00000318024 RPL30P62888 115 aaKnown RBP13.15□□□□□ -0.3
USH1C-202ENST00000318024 UBALD1Q8TB05 177 aa13.15□□□□□ -0.3
USH1C-202ENST00000318024 PRR7Q8TB68 274 aa13.15□□□□□ -0.3
USH1C-202ENST00000318024 TUBG2Q9NRH3 451 aa13.15□□□□□ -0.3
USH1C-202ENST00000318024 KCNS2Q9ULS6 477 aa13.15□□□□□ -0.3
USH1C-202ENST00000318024 A0A0U1RQK1 487 aa13.15□□□□□ -0.31
USH1C-202ENST00000318024 ZNF320A2RRD8 509 aa13.15□□□□□ -0.31
USH1C-202ENST00000318024 RBFOX2O43251 390 aaKnown RBP eCLIP13.15□□□□□ -0.31
USH1C-202ENST00000318024 SCGB1D1O95968 90 aa13.15□□□□□ -0.31
USH1C-202ENST00000318024 G0S2P27469 103 aa13.15□□□□□ -0.31
USH1C-202ENST00000318024 KLF3P57682 345 aaPredicted RBP13.15□□□□□ -0.31
USH1C-202ENST00000318024 ERVK11-1P61568 191 aa13.15□□□□□ -0.31
USH1C-202ENST00000318024 C3orf36Q3SXR2 165 aa13.15□□□□□ -0.31
USH1C-202ENST00000318024 LINC01560Q8TB33 94 aa13.15□□□□□ -0.31
USH1C-202ENST00000318024 BTF3L4Q96K17 158 aa13.15□□□□□ -0.31
USH1C-202ENST00000318024 ZG16O60844 167 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 OR2H2O95918 312 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 ESDP10768 282 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 CHRNB4P30926 498 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 SELENOTP62341 195 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 SPRNQ5BIV9 151 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 BTNL3Q6UXE8 466 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 OR10P1Q8NGE3 313 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 RAB1CQ92928 201 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 DERL1Q9BUN8 251 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 PLCE1Q9P212 2302 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 CACNA1BQ00975 2339 aa13.14□□□□□ -0.31
USH1C-202ENST00000318024 TRBV20OR9-2A0A075B6H5 130 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
USH1C-202ENST00000318024 RNF212BA8MTL3 300 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 PDE6DO43924 150 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 EGR1P18146 543 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 G6PCP35575 357 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 ATP5G3P48201 142 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 TEX43Q6ZNM6 134 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 C11orf53Q8IXP5 236 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 C1orf174Q8IYL3 243 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 PRR18Q8N4B5 295 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 MS4A10Q96PG2 267 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 C20orf144Q9BQM9 153 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 CXXC4Q9H2H0 198 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 WNT9BO14905 357 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 SPRY3O43610 288 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 HPRT1P00492 218 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 IGHV3-13P01766 116 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 ADMP35318 185 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 CDC34P49427 236 aaPredicted RBP13.13□□□□□ -0.31
USH1C-202ENST00000318024 ZNF645Q8N7E2 425 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 ZBTB34Q8NCN2 500 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.13□□□□□ -0.31
USH1C-202ENST00000318024 TRAPPC2LQ9UL33 140 aa13.13□□□□□ -0.31
USH1C-202ENST00000318024 RBM7Q9Y580 266 aaKnown RBP13.13□□□□□ -0.31
USH1C-202ENST00000318024 NXPH2O95156 264 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 ZNF25P17030 456 aaPredicted RBP13.12□□□□□ -0.31
USH1C-202ENST00000318024 UQCRFS1P47985 274 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 MSMO1Q15800 293 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 TPTE2P1Q5T6R2 138 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 Q6ZWC4 215 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 OR5T1Q8NG75 326 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 DTD1Q8TEA8 209 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 TBX15Q96SF7 602 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 KCNIP2Q9NS61 270 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 TMEM106BQ9NUM4 274 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 AURKAIP1Q9NWT8 199 aaPredicted RBP13.12□□□□□ -0.31
USH1C-202ENST00000318024 POLDIP2Q9Y2S7 368 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 IGSF10Q6WRI0 2623 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 M0QZK8 103 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 DLEU1O43261 78 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 SOX15O60248 233 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 NDUFB4O95168 129 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 KRASP01116 189 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 GAGE1Q13065 139 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 TMEM208Q9BTX3 173 aa13.12□□□□□ -0.31
USH1C-202ENST00000318024 MARCH11A6NNE9 402 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 SIRPB1O00241 398 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 S1PR2O95136 353 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 TFF1P04155 84 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 CEBPDP49716 269 aaPredicted RBP13.11□□□□□ -0.31
USH1C-202ENST00000318024 TDRG1Q3Y452 100 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 TCF23Q7RTU1 214 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 SFRP2Q96HF1 295 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 CHODLQ9H9P2 273 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 WDR83OSQ9Y284 106 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 COL12A1Q99715 3063 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 CFAP46Q8IYW2 2715 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 PGPEP1LA6NFU8 196 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 C15orf62A8K5M9 175 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 RAB29O14966 203 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 ZNF146Q15072 292 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 GCSAMLQ5JQS6 135 aa13.11□□□□□ -0.31
USH1C-202ENST00000318024 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms