RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 M0R2Z0 102 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 LIPFP07098 398 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PSG5Q15238 335 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 GCSAMLQ5JQS6 135 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 GRAMD2BQ96HH9 432 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 A0A1W2PQM1 296 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 KLF7O75840 302 aaPredicted RBP3.97□□□□□ -1.77
PTPN13-201ENST00000316707 DUTP33316 252 aaKnown RBP3.97□□□□□ -1.77
PTPN13-201ENST00000316707 MFAP2P55001 183 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 Q8N976 141 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 ABHD3Q8WU67 409 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 TSKUQ8WUA8 353 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 PSG11Q9UQ72 335 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 A0A096LPE4 126 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 A0A1W2PPZ6 126 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 NTF4P34130 210 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 RELBQ01201 579 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 GTF2H5Q6ZYL4 71 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 IFI44Q8TCB0 444 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 HES4Q9HCC6 221 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF257Q9Y2Q1 563 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 FAM231BA6NCW3 169 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 SEC11AP67812 179 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 EIF4EBP1Q13541 118 aaPredicted RBP3.97□□□□□ -1.77
PTPN13-201ENST00000316707 CT83Q5H943 113 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 LYG1Q8N1E2 194 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 DEFB125Q8N687 156 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 CHCHD1Q96BP2 118 aaKnown RBP3.97□□□□□ -1.77
PTPN13-201ENST00000316707 DUSP13Q9UII6 198 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 IGHV5-10-1A0A0J9YXX1 117 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 OCIAD2Q56VL3 154 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 FAM90A1Q86YD7 464 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 CACNG8Q8WXS5 425 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 NABP2Q9BQ15 211 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 FAM181BA6NEQ2 426 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 PRSS46E5RG02 174 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 M0R296 226 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 OR7C2O60412 319 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 BPIFB3P59826 476 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 Q56UQ5 140 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 SPACA3Q8IXA5 215 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 DEFB119Q8N690 84 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 SSMEM1Q8WWF3 244 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 DEPPQ9NTK1 212 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 YTHDF2Q9Y5A9 579 aaKnown RBP3.97□□□□□ -1.77
PTPN13-201ENST00000316707 KIAA1549LQ6ZVL6 1849 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 SMIM27A0A1W2PRY6 76 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 H0YJW9 148 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 MGST3O14880 152 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 CIDEAO60543 219 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 FCGR3BO75015 233 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 POU2AF1Q16633 256 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 TUSC5Q8IXB3 177 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 SMRP1Q8NCR6 262 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 OR52L2PQ8NGH6 319 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 DOCK9Q9BZ29 2069 aa3.97□□□□□ -1.77
PTPN13-201ENST00000316707 OR4C46A6NHA9 309 aa3.96□□□□□ -1.77
PTPN13-201ENST00000316707 RHBDL1O75783 438 aa3.96□□□□□ -1.77
PTPN13-201ENST00000316707 ZDHHC16Q969W1 377 aa3.96□□□□□ -1.77
PTPN13-201ENST00000316707 MGST2Q99735 147 aa3.96□□□□□ -1.77
PTPN13-201ENST00000316707 SEPSECSQ9HD40 501 aaKnown RBP3.96□□□□□ -1.77
PTPN13-201ENST00000316707 PRDM6Q9NQX0 595 aa3.96□□□□□ -1.77
PTPN13-201ENST00000316707 WASHC3Q9Y3C0 194 aa3.96□□□□□ -1.77
PTPN13-201ENST00000316707 CHTOPQ9Y3Y2 248 aaKnown RBP3.96□□□□□ -1.77
PTPN13-201ENST00000316707 MPDZO75970 2070 aa3.96□□□□□ -1.77
PTPN13-201ENST00000316707 CBY3A6NI87 242 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 A8MWL6 223 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 CRXO43186 299 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-201ENST00000316707 LEPROTL1O95214 131 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 NUDT3O95989 172 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 IGHV3-9P01782 118 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 TMEM140Q9NV12 185 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 K7EN84 100 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 SMPD2O60906 423 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 HIST1H1AQ02539 215 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-201ENST00000316707 TMPRSS7Q7RTY8 843 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 C15orf61A6NNL5 157 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 MT-CO3P00414 261 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 PSG7Q13046 419 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 RNF151Q2KHN1 245 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 KIAA1644Q3SXP7 199 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 ZNF766Q5HY98 468 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 RNASEKQ6P5S7 137 aaKnown RBP3.96□□□□□ -1.78
PTPN13-201ENST00000316707 UBALD1Q8TB05 177 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 BCL2L2Q92843 193 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-201ENST00000316707 SLC25A33Q9BSK2 321 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 WNT10AQ9GZT5 417 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 OBP2BQ9NPH6 170 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 AMMECR1Q9Y4X0 333 aaPredicted RBP3.96□□□□□ -1.78
PTPN13-201ENST00000316707 CABIN1Q9Y6J0 2220 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 A6NDN8 102 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 IQCF6A8MYZ5 107 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 RRHO14718 337 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 MGST1P10620 155 aaKnown RBP3.96□□□□□ -1.78
PTPN13-201ENST00000316707 IGLL1P15814 213 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 SUB1P53999 127 aaKnown RBP eCLIP3.96□□□□□ -1.78
PTPN13-201ENST00000316707 TCL1AP56279 114 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 BRWD1-AS2P59051 145 aa3.96□□□□□ -1.78
PTPN13-201ENST00000316707 UBE2L3P68036 154 aaKnown RBP3.96□□□□□ -1.78
PTPN13-201ENST00000316707 ABHD17BQ5VST6 288 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms