RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 H3BTX0 84 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 RPL13AP40429 203 aaKnown RBP11.62□□□□□ -0.55
SPAST-201ENST00000315285 ZIC4Q8N9L1 334 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 MYOZ3Q8TDC0 251 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 A0A087WWC5 75 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 FAM106CPP0CH98 169 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 FAM201AQ5SY85 155 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 FAM166AQ6J272 317 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 WDYHV1Q96HA8 205 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 TRBV9A0A0B4J1U6 114 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 CBLN1P23435 193 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 LHFPL1Q86WI0 220 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 GTF3AQ92664 365 aaKnown RBP11.62□□□□□ -0.55
SPAST-201ENST00000315285 FOXD3Q9UJU5 478 aaPredicted RBP11.62□□□□□ -0.55
SPAST-201ENST00000315285 ZFP30Q9Y2G7 519 aa11.62□□□□□ -0.55
SPAST-201ENST00000315285 LEPROTL1O95214 131 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 LINC00271P0C7V0 271 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 LCN2P80188 198 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 OR4A47Q6IF82 309 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 RBPMS2Q6ZRY4 209 aaKnown RBP11.61□□□□□ -0.55
SPAST-201ENST00000315285 CLEC7AQ9BXN2 247 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 AKAP6Q13023 2319 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 IGHV1-69-2A0A0G2JMI3 117 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 MFAP4P55083 255 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 ZFP36L1Q07352 338 aaKnown RBP11.61□□□□□ -0.55
SPAST-201ENST00000315285 TMEM78Q5T7P6 136 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 OSR1Q8TAX0 266 aaPredicted RBP11.61□□□□□ -0.55
SPAST-201ENST00000315285 TUBA4BQ9H853 241 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 IGKV1-12A0A0C4DH73 117 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 IGKV1D-12P01611 117 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 CA7P43166 264 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 ARF6P62330 175 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 FAM27E3Q08E93 113 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 PET117Q6UWS5 81 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.61□□□□□ -0.55
SPAST-201ENST00000315285 FGFBP3Q8TAT2 258 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 GUCD1Q96NT3 240 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 SSBP3Q9BWW4 388 aaPredicted RBP11.61□□□□□ -0.55
SPAST-201ENST00000315285 SDF2L1Q9HCN8 221 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 HERVK_113P61574 105 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 LYRM7Q5U5X0 104 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 FAM216BQ8N7L0 139 aa11.61□□□□□ -0.55
SPAST-201ENST00000315285 MAS1LP35410 378 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
SPAST-201ENST00000315285 ID3Q02535 119 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 TCF20Q9UGU0 1960 aaKnown RBP11.6□□□□□ -0.55
SPAST-201ENST00000315285 TRAV24A0A0B4J272 114 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 MOSP00540 346 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 ACSF3Q4G176 576 aaPredicted RBP11.6□□□□□ -0.55
SPAST-201ENST00000315285 PEAR1Q5VY43 1037 aaPredicted RBP11.6□□□□□ -0.55
SPAST-201ENST00000315285 NABP1Q96AH0 204 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 EAF1Q96JC9 268 aaPredicted RBP11.6□□□□□ -0.55
SPAST-201ENST00000315285 IFI27L2Q9H2X8 130 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 UQCR10Q9UDW1 63 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 KBTBD11-OT1A0A1B0GTJ5 212 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 CGAP01215 116 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 IGFBP2P18065 325 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 CKS2P33552 79 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 UNQ5815/PRO19632Q6UWF5 114 aa11.6□□□□□ -0.55
SPAST-201ENST00000315285 SRSF12Q8WXF0 261 aaKnown RBP11.6□□□□□ -0.55
SPAST-201ENST00000315285 RALYQ9UKM9 306 aaKnown RBP11.6□□□□□ -0.55
SPAST-201ENST00000315285 SUPT4H1P63272 117 aaKnown RBP11.6□□□□□ -0.55
SPAST-201ENST00000315285 TRAV30A0A087WSZ9 112 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 C9orf172C9J069 976 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 NMUP48645 174 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 LOXL3P58215 753 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 ICAM4Q14773 271 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 DNM1P46Q6ZS02 220 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 LRTM2Q8N967 370 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 ATP5G3P48201 142 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 WFDC3Q8IUB2 231 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 PRR19A6NJB7 356 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 TM4SF5O14894 197 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 HTN1P15515 57 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 TCTAP57738 103 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 LINC00305Q7Z4B0 112 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 OR4D5Q8NGN0 318 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 ELOVL5Q9NYP7 299 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 PINLYPA6NC86 204 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 HINT1P49773 126 aaPredicted RBP11.59□□□□□ -0.55
SPAST-201ENST00000315285 ZNF497Q6ZNH5 498 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 CBLN4Q9NTU7 201 aa11.59□□□□□ -0.55
SPAST-201ENST00000315285 PNKDQ8N490 385 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 C9orf106Q8NAJ2 232 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 FAM131CQ96AQ9 280 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 METTL26Q96S19 204 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 SCO2A0A1W2PP80 73 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 GOLT1AQ6ZVE7 132 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 FAM90A1Q86YD7 464 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 MUC15Q8N387 334 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 WFDC1Q9HC57 220 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 RIF1Q5UIP0 2472 aaKnown RBP11.58□□□□□ -0.56
SPAST-201ENST00000315285 TCF21O43680 179 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 LIPFP07098 398 aa11.58□□□□□ -0.56
SPAST-201ENST00000315285 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
SPAST-201ENST00000315285 ZCCHC14Q8WYQ9 949 aaKnown RBP11.58□□□□□ -0.56
SPAST-201ENST00000315285 SPTBN1Q01082 2364 aaKnown RBP11.58□□□□□ -0.56
SPAST-201ENST00000315285 B9A039 149 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms