RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 GAGE12HA6NDE8 117 aa8.87□□□□□ -0.99
MSRB3-201ENST00000308259 PROB1E7EW31 1015 aa8.87□□□□□ -0.99
MSRB3-201ENST00000308259 MPPED1O15442 326 aa8.87□□□□□ -0.99
MSRB3-201ENST00000308259 APCSP02743 223 aa8.87□□□□□ -0.99
MSRB3-201ENST00000308259 F2RP25116 425 aa8.87□□□□□ -0.99
MSRB3-201ENST00000308259 ZP4Q12836 540 aa8.87□□□□□ -0.99
MSRB3-201ENST00000308259 C17orf82Q86X59 251 aaPredicted RBP8.87□□□□□ -0.99
MSRB3-201ENST00000308259 OR4A5Q8NH83 315 aa8.87□□□□□ -0.99
MSRB3-201ENST00000308259 TMEM140Q9NV12 185 aa8.87□□□□□ -0.99
MSRB3-201ENST00000308259 PIGLQ9Y2B2 252 aa8.87□□□□□ -0.99
MSRB3-201ENST00000308259 SHANK1Q9Y566 2161 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 EML6Q6ZMW3 1958 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 MEF2CQ06413 473 aaPredicted RBP8.86□□□□□ -0.99
MSRB3-201ENST00000308259 GAGE5Q13069 117 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 GAGE6Q13070 117 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 FXYD3Q14802 87 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 TIGITQ495A1 244 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 LYRM7Q5U5X0 104 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 NFAM1Q8NET5 270 aaPredicted RBP8.86□□□□□ -0.99
MSRB3-201ENST00000308259 PNRC2Q9NPJ4 139 aaKnown RBP8.86□□□□□ -0.99
MSRB3-201ENST00000308259 MAP1BP46821 2468 aaKnown RBP8.86□□□□□ -0.99
MSRB3-201ENST00000308259 CTXND1A0A1B0GTU2 59 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 TAX1BP3O14907 124 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 CCL4P13236 92 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 GPR183P32249 361 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 NPBWR2P48146 333 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 PLP2Q04941 152 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 WDR82Q6UXN9 313 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 OCIAD1Q9NX40 245 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 CACNG5Q9UF02 275 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 HELTA6NFD8 242 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 H3BVH4 76 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 CSN3P07498 182 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 MMD2Q8IY49 270 aa8.86□□□□□ -0.99
MSRB3-201ENST00000308259 G3V4G9 280 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 DEFA4P12838 97 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 CLDN15P56746 228 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 TMPRSS3P57727 454 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 IL15RAQ13261 267 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 CT55Q8WUE5 264 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 BORCS8Q96FH0 119 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 TEX50A0A1B0GTY4 177 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 NAPSAO96009 420 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 PTGDSP41222 190 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 LGALS7P47929 136 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 ASCL4Q6XD76 172 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 MCRIP2Q9BUT9 160 aaKnown RBP8.85□□□□□ -0.99
MSRB3-201ENST00000308259 SH2D2AQ9NP31 389 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 KBTBD11-OT1A0A1B0GTJ5 212 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 VDAC1P21796 283 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 SERF2P84101 59 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 PRR31Q5SQ13 230 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 TMEM70Q9BUB7 260 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 LIME1Q9H400 295 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 NBEAQ8NFP9 2946 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 CD5LO43866 347 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 GCSHP23434 173 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 RBMXL3Q8N7X1 1067 aaKnown RBP8.85□□□□□ -0.99
MSRB3-201ENST00000308259 PYGO2Q9BRQ0 406 aa8.85□□□□□ -0.99
MSRB3-201ENST00000308259 TEX48A0A1B0GUV7 120 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 VENTXO95231 258 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 CELA3AP09093 270 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 CRIP3Q6Q6R5 217 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 ZNF562Q6V9R5 426 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 RAB40CQ96S21 281 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 ST20Q9HBF5 79 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 F11RQ9Y624 299 aaKnown RBP8.84□□□□□ -0.99
MSRB3-201ENST00000308259 A0A0G2JLM5 398 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 LINC00869P0C866 280 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 ATP5G3P48201 142 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 ATP5J2P56134 94 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 MORN2Q502X0 79 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 SLC25A47Q6Q0C1 308 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 BHLHA15Q7RTS1 189 aaPredicted RBP8.84□□□□□ -0.99
MSRB3-201ENST00000308259 MSI2Q96DH6 328 aaKnown RBP8.84□□□□□ -0.99
MSRB3-201ENST00000308259 CDIPTO14735 213 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 SUMO3P55854 103 aaPredicted RBP8.84□□□□□ -0.99
MSRB3-201ENST00000308259 BVES-AS1Q5T3Y7 98 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 AHCTF1Q8WYP5 2266 aa8.84□□□□□ -0.99
MSRB3-201ENST00000308259 SYNGR2O43760 224 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 DOK3Q7L591 496 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 CD300EQ496F6 205 aaPredicted RBP8.83□□□□□ -1
MSRB3-201ENST00000308259 LHFPL1Q86WI0 220 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 OR1F12Q8NHA8 337 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 CACNA1EQ15878 2313 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 C3orf80F5H4A9 247 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 IGHV3-9P01782 118 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 APOBEC3AP31941 199 aaPredicted RBP8.83□□□□□ -1
MSRB3-201ENST00000308259 G6PCP35575 357 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 ZFAND6Q6FIF0 208 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 CCDC144NLQ6NUI1 221 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 MRPL16Q9NX20 251 aaKnown RBP8.83□□□□□ -1
MSRB3-201ENST00000308259 A0A1W2PS18 150 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 PRRG2O14669 202 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 LEPROTL1O95214 131 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 TYMSP04818 313 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 GATA2P23769 480 aaPredicted RBP8.83□□□□□ -1
MSRB3-201ENST00000308259 MFAP2P55001 183 aa8.83□□□□□ -1
MSRB3-201ENST00000308259 RPS20P60866 119 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms