RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 H7C2Y5 167 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 SHOXO15266 292 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 SAA1P0DJI8 122 aaPredicted RBP9.62□□□□□ -0.87
TRIM40-205ENST00000307859 MC5RP33032 325 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 F2RL1P55085 397 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 DLX1P56177 255 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 PJVKQ0ZLH3 352 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 VWC2Q2TAL6 325 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 TMEM182Q6ZP80 229 aaPredicted RBP9.62□□□□□ -0.87
TRIM40-205ENST00000307859 OR4C13Q8NGP0 309 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 LHX4Q969G2 390 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 PINX1Q96BK5 328 aaKnown RBP9.62□□□□□ -0.87
TRIM40-205ENST00000307859 FLYWCH2Q96CP2 140 aaKnown RBP9.62□□□□□ -0.87
TRIM40-205ENST00000307859 RBMXL1Q96E39 390 aaKnown RBP9.62□□□□□ -0.87
TRIM40-205ENST00000307859 CLCC1Q96S66 551 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 NARFLQ9H6Q4 476 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 ONECUT1Q9UBC0 465 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 AMMECR1Q9Y4X0 333 aaPredicted RBP9.62□□□□□ -0.87
TRIM40-205ENST00000307859 RFNGQ9Y644 331 aa9.62□□□□□ -0.87
TRIM40-205ENST00000307859 BUB1B-PAK6H3BSN5 160 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 KBTBD11O94819 623 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 IGHV2-5P01817 119 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 CAMLGP49069 296 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 RPP30P78346 268 aaKnown RBP9.61□□□□□ -0.87
TRIM40-205ENST00000307859 OR8G2PQ6IF36 304 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 KIR3DL3Q8N743 410 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 OR10P1Q8NGE3 313 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 OR4P4Q8NGL7 312 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 OR4A5Q8NH83 315 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 SCGB1C1Q8TD33 95 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 LINC00052Q96N35 136 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 PSMG3Q9BT73 122 aaPredicted RBP9.61□□□□□ -0.87
TRIM40-205ENST00000307859 TMEM147Q9BVK8 224 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 WDR61Q9GZS3 305 aaKnown RBP9.61□□□□□ -0.87
TRIM40-205ENST00000307859 HIPK2Q9H2X6 1198 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 HRH4Q9H3N8 390 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 OR51B2Q9Y5P1 312 aa9.61□□□□□ -0.87
TRIM40-205ENST00000307859 UBE2L5PA0A1B0GUS4 154 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 LY6LH3BQJ8 138 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 IGLV2-23P01705 113 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 FOSL1P15407 271 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 COX7A1P24310 79 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 SLC25A24Q6NUK1 477 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 C1orf122Q6ZSJ8 110 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 THNSL2Q86YJ6 484 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 OR11H6Q8NGC7 330 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 TMEM167AQ8TBQ9 72 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 MS4A7Q9GZW8 240 aaPredicted RBP9.6□□□□□ -0.87
TRIM40-205ENST00000307859 HEYLQ9NQ87 328 aaPredicted RBP9.6□□□□□ -0.87
TRIM40-205ENST00000307859 FKBP11Q9NYL4 201 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 WNK2Q9Y3S1 2297 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 IGHV4-39P01824 125 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 PRH1P02810 166 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 USF1P22415 310 aaPredicted RBP9.6□□□□□ -0.87
TRIM40-205ENST00000307859 PRTN3P24158 256 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 HOXA1P49639 335 aaPredicted RBP9.6□□□□□ -0.87
TRIM40-205ENST00000307859 FHITP49789 147 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 PRCDQ00LT1 54 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 DPPA3Q6W0C5 159 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 CENPVQ7Z7K6 275 aaPredicted RBP9.6□□□□□ -0.87
TRIM40-205ENST00000307859 PNKDQ8N490 385 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 OR5B3Q8NH48 314 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 VSTM2AQ8TAG5 236 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 TMEM170AQ8WVE7 144 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 TAF15Q92804 592 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRIM40-205ENST00000307859 RSG1Q9BU20 258 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 UNKLQ9H9P5 680 aaKnown RBP9.6□□□□□ -0.87
TRIM40-205ENST00000307859 UQCC1Q9NVA1 299 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 TIMM9Q9Y5J7 89 aa9.6□□□□□ -0.87
TRIM40-205ENST00000307859 PLXNB1O43157 2135 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 IGHV1-3A0A0C4DH29 117 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 ODF3BA8MYP8 253 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 PRSS46E5RG02 174 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 ENSAO43768 121 aaKnown RBP9.59□□□□□ -0.87
TRIM40-205ENST00000307859 IFNA10P01566 189 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 MYOD1P15172 320 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 MDKP21741 143 aaPredicted RBP9.59□□□□□ -0.87
TRIM40-205ENST00000307859 LGALS7P47929 136 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 ARF6P62330 175 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 PAX2Q02962 417 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 PRB3Q04118 309 aaPredicted RBP9.59□□□□□ -0.87
TRIM40-205ENST00000307859 ZNF616Q08AN1 781 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 AKR1C8PQ5T2L2 129 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 HCP5Q6MZN7 132 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 CCDC28AQ8IWP9 274 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 COMMD1Q8N668 190 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 BPIFCQ8NFQ6 507 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 FAM213BQ8TBF2 198 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 CCL19Q99731 98 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 BPESC1Q9GZL8 116 aa9.59□□□□□ -0.87
TRIM40-205ENST00000307859 TEX50A0A1B0GTY4 177 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 A0A1W2PPI3 338 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 RRHO14718 337 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 ZFP36P26651 326 aaKnown RBP9.58□□□□□ -0.88
TRIM40-205ENST00000307859 PDLIM4P50479 330 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 LMO4P61968 165 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 RPS16P62249 146 aaKnown RBP9.58□□□□□ -0.88
TRIM40-205ENST00000307859 RPL8P62917 257 aaKnown RBP9.58□□□□□ -0.88
TRIM40-205ENST00000307859 SERF2P84101 59 aa9.58□□□□□ -0.88
TRIM40-205ENST00000307859 SLC24A4Q8NFF2 622 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms