RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 PTBP1P26599 531 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMIM4-201ENST00000307106 TMEM50BP56557 158 aa8.52□□□□□ -1.05
SMIM4-201ENST00000307106 SMN1Q16637 294 aaKnown RBP8.52□□□□□ -1.05
SMIM4-201ENST00000307106 C12orf74Q32Q52 190 aa8.52□□□□□ -1.05
SMIM4-201ENST00000307106 KCTD9Q7L273 389 aa8.52□□□□□ -1.05
SMIM4-201ENST00000307106 PUSL1Q8N0Z8 303 aaKnown RBP8.52□□□□□ -1.05
SMIM4-201ENST00000307106 FAM89BQ8N5H3 189 aa8.52□□□□□ -1.05
SMIM4-201ENST00000307106 PECRQ9BY49 303 aa8.52□□□□□ -1.05
SMIM4-201ENST00000307106 THYN1Q9P016 225 aa8.52□□□□□ -1.05
SMIM4-201ENST00000307106 MRPS7Q9Y2R9 242 aaKnown RBP8.52□□□□□ -1.05
SMIM4-201ENST00000307106 CGB1A6NKQ9 187 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 ZNF705EA8MWA4 302 aaPredicted RBP8.51□□□□□ -1.05
SMIM4-201ENST00000307106 RAB27BO00194 218 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 BPNT1O95861 308 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 MAPK3P27361 379 aaPredicted RBP8.51□□□□□ -1.05
SMIM4-201ENST00000307106 LIPKQ5VXJ0 399 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 LEMD1Q68G75 181 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 GBGT1Q8N5D6 347 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 VN1R17PQ8TDU5 208 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 BSCL2Q96G97 398 aaPredicted RBP8.51□□□□□ -1.05
SMIM4-201ENST00000307106 CMTM3Q96MX0 182 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 GINS4Q9BRT9 223 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 SMPXQ9UHP9 88 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 DIMT1Q9UNQ2 313 aaKnown RBP8.51□□□□□ -1.05
SMIM4-201ENST00000307106 PRELID3BQ9Y3B1 194 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 X6R8D5 127 aa8.51□□□□□ -1.05
SMIM4-201ENST00000307106 IRGMA1A4Y4 181 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 C15orf62A8K5M9 175 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 CHEK1O14757 476 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 DIRAS3O95661 229 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 TAS2R43P59537 309 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 RPL30P62888 115 aaKnown RBP8.5□□□□□ -1.05
SMIM4-201ENST00000307106 RPL8P62917 257 aaKnown RBP8.5□□□□□ -1.05
SMIM4-201ENST00000307106 MRPS15P82914 257 aaKnown RBP8.5□□□□□ -1.05
SMIM4-201ENST00000307106 RBM48Q5RL73 367 aaKnown RBP8.5□□□□□ -1.05
SMIM4-201ENST00000307106 SPSB3Q6PJ21 355 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 LRRTM1Q86UE6 522 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 STHQ8IWL8 128 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 ZNF485Q8NCK3 441 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 RHPN1-AS1Q9BWJ2 59 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 DNAH5Q8TE73 4624 aa8.5□□□□□ -1.05
SMIM4-201ENST00000307106 IGHV3-49A0A0A0MS15 119 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 IGHV7-4-1A0A0J9YVY3 117 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 LOC100130705A0A1B0GUX0 176 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 J3QRK9 145 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 WBP4O75554 376 aaKnown RBP8.49□□□□□ -1.05
SMIM4-201ENST00000307106 CDK1P06493 297 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 FCGR3AP08637 254 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 GIG44P09565 113 aaPredicted RBP8.49□□□□□ -1.05
SMIM4-201ENST00000307106 HLA-GP17693 338 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 DEFB131AP59861 70 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 PAFAH1B2P68402 229 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 INSL4Q14641 139 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 TMEM41BQ5BJD5 291 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 PLAC9Q5JTB6 97 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 C1orf146Q5VVC0 180 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 FAM90A2PQ658T7 463 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 H1FOOQ8IZA3 346 aaPredicted RBP8.49□□□□□ -1.05
SMIM4-201ENST00000307106 TMEM116Q8NCL8 245 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 OR4S2Q8NH73 311 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 MAFIPQ8WZ33 124 aa8.49□□□□□ -1.05
SMIM4-201ENST00000307106 SMPD3Q9NY59 655 aaPredicted RBP8.49□□□□□ -1.05
SMIM4-201ENST00000307106 IGLC7A0M8Q6 106 aa8.48□□□□□ -1.05
SMIM4-201ENST00000307106 EPM2AB3EWF7 344 aa8.48□□□□□ -1.05
SMIM4-201ENST00000307106 CD36P16671 472 aa8.48□□□□□ -1.05
SMIM4-201ENST00000307106 NPY1RP25929 384 aa8.48□□□□□ -1.05
SMIM4-201ENST00000307106 P2RY14Q15391 338 aa8.48□□□□□ -1.05
SMIM4-201ENST00000307106 CBR4Q8N4T8 237 aa8.48□□□□□ -1.05
SMIM4-201ENST00000307106 TMEM80Q96HE8 168 aa8.48□□□□□ -1.05
SMIM4-201ENST00000307106 CYB5BO43169 146 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 DFFBO76075 338 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 CD1AP06126 327 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 INAFM2P0DMQ5 153 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 SPP1P10451 314 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 C4BPBP20851 252 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 OR2B8PP59922 312 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 PLA2G7Q13093 441 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 RNF212Q495C1 297 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 ACSM3Q53FZ2 586 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 MORN3Q6PF18 240 aaPredicted RBP8.47□□□□□ -1.05
SMIM4-201ENST00000307106 ZNF367Q7RTV3 350 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 UBAC2Q8NBM4 344 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 GIMAP1Q8WWP7 306 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 PHYHIPQ92561 330 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 TMEM14BQ9NUH8 114 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 CLEC5AQ9NY25 188 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 TBC1D24Q9ULP9 559 aa8.47□□□□□ -1.05
SMIM4-201ENST00000307106 RBMX2Q9Y388 322 aaKnown RBP8.47□□□□□ -1.05
SMIM4-201ENST00000307106 IGHV3OR16-13A0A075B7E8 117 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 IGHV3-21A0A0B4J1V1 117 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 IGHV3-74A0A0B4J1X5 117 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 F8W735 103 aaPredicted RBP8.46□□□□□ -1.06
SMIM4-201ENST00000307106 HRASP01112 189 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 CD37P11049 281 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 SSX1Q16384 188 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 SLC25A24Q6NUK1 477 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 TCF24Q7RTU0 167 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 TRPT1Q86TN4 253 aaKnown RBP8.46□□□□□ -1.06
SMIM4-201ENST00000307106 FAM24BQ8N5W8 94 aa8.46□□□□□ -1.06
SMIM4-201ENST00000307106 OR56B1Q8NGI3 324 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms