RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TNFRSF9Q07011 255 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 SMAGPQ0VAQ4 97 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 PSG5Q15238 335 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
PTPRE-202ENST00000306042 ZNF430Q9H8G1 570 aaPredicted RBP7.68□□□□□ -1.18
PTPRE-202ENST00000306042 CHD8Q9HCK8 2581 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 IGLV3-9A0A075B6K5 115 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 LINC00869P0C866 280 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 DAZAP2Q15038 168 aaPredicted RBP7.67□□□□□ -1.18
PTPRE-202ENST00000306042 HLA-DRB5Q30154 266 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 NHLRC3Q5JS37 347 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 FAM103A1Q9BTL3 118 aaKnown RBP7.67□□□□□ -1.18
PTPRE-202ENST00000306042 ZNF331Q9NQX6 463 aaPredicted RBP7.67□□□□□ -1.18
PTPRE-202ENST00000306042 CSPG4Q6UVK1 2322 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 C10orf142B7Z368 130 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 CFDP00746 253 aaPredicted RBP7.67□□□□□ -1.18
PTPRE-202ENST00000306042 PRTN3P24158 256 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 GATA4P43694 442 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 MYPOPQ86VE0 399 aaPredicted RBP7.67□□□□□ -1.18
PTPRE-202ENST00000306042 TBL2Q9Y4P3 447 aaKnown RBP7.67□□□□□ -1.18
PTPRE-202ENST00000306042 F8VVB4 439 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 F8VWA3 439 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 NDUFS7O75251 213 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 CD74P04233 296 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 PAX6P26367 422 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 TPTE2P1Q5T6R2 138 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 GSX2Q9BZM3 304 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 C5orf66Q9H5L9 145 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 MPZP25189 248 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 SAA4P35542 130 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 IZUMO4Q1ZYL8 232 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 RPL7L1Q6DKI1 246 aaKnown RBP7.67□□□□□ -1.18
PTPRE-202ENST00000306042 SVBPQ8N300 66 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 FAM89BQ8N5H3 189 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 Q8TCH9 128 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 CCDC168Q8NDH2 2452 aa7.67□□□□□ -1.18
PTPRE-202ENST00000306042 CD33P20138 364 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 ATP5IP56385 69 aaPredicted RBP7.66□□□□□ -1.18
PTPRE-202ENST00000306042 Q6ZR03 302 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 TVP23CQ96ET8 276 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 SMCO4Q9NRQ5 59 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 HIVEP2P31629 2446 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 FCGR2BP31994 310 aaPredicted RBP7.66□□□□□ -1.18
PTPRE-202ENST00000306042 TCTE3Q8IZS6 198 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 SUN5Q8TC36 379 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 WDR61Q9GZS3 305 aaKnown RBP7.66□□□□□ -1.18
PTPRE-202ENST00000306042 NPDC1Q9NQX5 325 aaPredicted RBP7.66□□□□□ -1.18
PTPRE-202ENST00000306042 C21orf62Q9NYP8 219 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 SERTM2A0A1B0GWG4 89 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 PSMB11A5LHX3 300 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 CHEK1O14757 476 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 IGHV3-48P01763 117 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 IGHV3-23P01764 117 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 SAA1P0DJI8 122 aaPredicted RBP7.66□□□□□ -1.18
PTPRE-202ENST00000306042 MMP9P14780 707 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 SEM1Q6ZVN7 128 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 SRSF12Q8WXF0 261 aaKnown RBP7.66□□□□□ -1.18
PTPRE-202ENST00000306042 MBPP02686 304 aaPredicted RBP7.66□□□□□ -1.18
PTPRE-202ENST00000306042 HKR1P10072 659 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 S4R3C0 116 aa7.66□□□□□ -1.18
PTPRE-202ENST00000306042 MUC22E2RYF6 1773 aaPredicted RBP7.65□□□□□ -1.18
PTPRE-202ENST00000306042 ANKRD11Q6UB99 2663 aaPredicted RBP7.65□□□□□ -1.18
PTPRE-202ENST00000306042 KIAA2026Q5HYC2 2103 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 MPDU1O75352 247 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 WISP2O76076 250 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 GPR183P32249 361 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 KHDC3LQ587J8 217 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 ZFP82Q8N141 532 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 NRGNQ92686 78 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 TP53RKQ96S44 253 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 LINC00527Q9UJ94 153 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 DBX1A6NMT0 343 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 H7BYZ3 331 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 CA2P00918 260 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 CD55P08174 381 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 MAS1LP35410 378 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 C11orf91Q3C1V1 193 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 FBXL19-AS1Q494R0 122 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 GTSCR1Q86UQ5 136 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 BPIFA4PQ86YQ2 179 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 ZNF738Q8NE65 137 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 OR4B1Q8NGF8 309 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 NPIPB3Q92617 1050 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 RAX2Q96IS3 184 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 TOLLIPQ9H0E2 274 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 PLSCR3Q9NRY6 295 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 TMEM56-RWDD3S4R434 201 aa7.65□□□□□ -1.18
PTPRE-202ENST00000306042 SNRPD3P62318 126 aaKnown RBP7.65□□□□□ -1.19
PTPRE-202ENST00000306042 PAX5Q02548 391 aa7.65□□□□□ -1.19
PTPRE-202ENST00000306042 CLEC19AQ6UXS0 136 aa7.65□□□□□ -1.19
PTPRE-202ENST00000306042 LRRC75A-AS1Q8N1F1 130 aa7.65□□□□□ -1.19
PTPRE-202ENST00000306042 OR10J6PQ8NGY7 276 aa7.65□□□□□ -1.19
PTPRE-202ENST00000306042 WDR87Q6ZQQ6 2873 aa7.65□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV1-3A0A0C4DH29 117 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 IGHV2-70DA0A0C4DH43 119 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 RRHO14718 337 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 DLX6P56179 175 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 DCAF16Q9NXF7 216 aa7.64□□□□□ -1.19
PTPRE-202ENST00000306042 MALRD1Q5VYJ5 2156 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms