RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CHODLQ9H9P2 273 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 PRR19A6NJB7 356 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 VENTXO95231 258 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 ACSF3Q4G176 576 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-201ENST00000303531 ZNF837Q96EG3 531 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-201ENST00000303531 CARHSP1Q9Y2V2 147 aaKnown RBP11.8□□□□□ -0.52
PRKCB-201ENST00000303531 C17orf98A8MV24 154 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 UBE2L6O14933 153 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 AMMECR1LQ6DCA0 310 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 KLK15Q9H2R5 256 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 PRDM6Q9NQX0 595 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 CDK2AP1O14519 115 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 DMRT1Q9Y5R6 373 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 RNF222A6NCQ9 220 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 ATXN7O15265 892 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-201ENST00000303531 GPX1P07203 203 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 FAM106AQ4KMX7 169 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 DDB2Q92466 427 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 C1QTNF5Q9BXJ0 243 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 PATJQ8NI35 1801 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 IGFBP3P17936 291 aaPredicted RBP11.8□□□□□ -0.52
PRKCB-201ENST00000303531 GLRXP35754 106 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 RRN3P1Q2M238 152 aa11.8□□□□□ -0.52
PRKCB-201ENST00000303531 A0A1B0GTI1 187 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 COX6B1P14854 86 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 ATP5IP56385 69 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-201ENST00000303531 GP6Q9HCN6 339 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 F11RQ9Y624 299 aaKnown RBP11.79□□□□□ -0.52
PRKCB-201ENST00000303531 CA7P43166 264 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 DLX6P56179 175 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 TIMM23BQ5SRD1 257 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 TMEM183AQ8IXX5 376 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 VWCEQ96DN2 955 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 CASP8AP2Q9UKL3 1982 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 BRCA1P38398 1863 aaKnown RBP11.79□□□□□ -0.52
PRKCB-201ENST00000303531 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 FADS6Q8N9I5 356 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 SPTBN1Q01082 2364 aaKnown RBP11.79□□□□□ -0.52
PRKCB-201ENST00000303531 OR13A1Q8NGR1 328 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 LNP1A1A4G5 178 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 C7orf71A4D174 169 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 B9A039 149 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 CGAP01215 116 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 HBBP68871 147 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 FAM201AQ5SY85 155 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 NPPCP23582 126 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 GPR82Q96P67 336 aa11.79□□□□□ -0.52
PRKCB-201ENST00000303531 PLSCR2Q9NRY7 297 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 ELOVL5Q9NYP7 299 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 RAXQ9Y2V3 346 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 ADIPOQQ15848 244 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 LINC01560Q8TB33 94 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 ZNF256Q9Y2P7 627 aaPredicted RBP11.78□□□□□ -0.52
PRKCB-201ENST00000303531 A8MXK9 166 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 COX6CP09669 75 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 IGFBP2P18065 325 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 BIVMQ86UB2 503 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 EEF1AKMT3Q96AZ1 226 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 IFI27L2Q9H2X8 130 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 BTCP35070 178 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 FAM27E3Q08E93 113 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 FOXI3A8MTJ6 420 aaPredicted RBP11.78□□□□□ -0.52
PRKCB-201ENST00000303531 PLP1P60201 277 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 OR4D5Q8NGN0 318 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
PRKCB-201ENST00000303531 ZDBF2Q9HCK1 2354 aa11.78□□□□□ -0.52
PRKCB-201ENST00000303531 INTS1Q8N201 2190 aaKnown RBP11.77□□□□□ -0.52
PRKCB-201ENST00000303531 IGHV3OR16-10A0A075B7F0 116 aa11.77□□□□□ -0.52
PRKCB-201ENST00000303531 SRP19P09132 144 aaKnown RBP11.77□□□□□ -0.52
PRKCB-201ENST00000303531 RAB9AP51151 201 aa11.77□□□□□ -0.52
PRKCB-201ENST00000303531 PRSS8Q16651 343 aa11.77□□□□□ -0.52
PRKCB-201ENST00000303531 DICER1Q9UPY3 1922 aaKnown RBP11.77□□□□□ -0.52
PRKCB-201ENST00000303531 ICAM4Q14773 271 aa11.77□□□□□ -0.52
PRKCB-201ENST00000303531 GDF15Q99988 308 aa11.77□□□□□ -0.52
PRKCB-201ENST00000303531 A0A087WV48 116 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 SLC17A3O00476 420 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 NRN1LQ496H8 165 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 FAM216BQ8N7L0 139 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 OSR1Q8TAX0 266 aaPredicted RBP11.77□□□□□ -0.53
PRKCB-201ENST00000303531 TMEM70Q9BUB7 260 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 TMEM106BQ9NUM4 274 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 PSME4Q14997 1843 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 GVINP1Q7Z2Y8 2422 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 IGHV3OR16-13A0A075B7E8 117 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 IGHV3-74A0A0B4J1X5 117 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 FOXA3P55318 350 aaPredicted RBP11.77□□□□□ -0.53
PRKCB-201ENST00000303531 FAM74A4Q5TZK3 123 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 DCTN5Q9BTE1 182 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 LGALS3P17931 250 aaKnown RBP11.77□□□□□ -0.53
PRKCB-201ENST00000303531 BRWD3Q6RI45 1802 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 SCO2A0A1W2PP80 73 aa11.77□□□□□ -0.53
PRKCB-201ENST00000303531 SIPA1L1O43166 1804 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 LCN2P80188 198 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 NEUROG3Q9Y4Z2 214 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 RBFOX2O43251 390 aaKnown RBP eCLIP11.76□□□□□ -0.534e-7■□□□□ 9.2
PRKCB-201ENST00000303531 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 GPX4P36969 197 aaPredicted RBP11.76□□□□□ -0.53
PRKCB-201ENST00000303531 ATP5J2P56134 94 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 PSG7Q13046 419 aa11.76□□□□□ -0.53
PRKCB-201ENST00000303531 PARD6GQ9BYG4 376 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms