RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 TMEM133Q9H2Q1 129 aa11.63□□□□□ -0.55
C9orf3-202ENST00000297979 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
C9orf3-202ENST00000297979 METTL15P1P0C7V9 234 aa11.63□□□□□ -0.55
C9orf3-202ENST00000297979 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
C9orf3-202ENST00000297979 MC5RP33032 325 aa11.63□□□□□ -0.55
C9orf3-202ENST00000297979 USF2Q15853 346 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-202ENST00000297979 DMRTA1Q5VZB9 504 aa11.63□□□□□ -0.55
C9orf3-202ENST00000297979 HSD17B13Q7Z5P4 300 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-202ENST00000297979 ABHD12Q8N2K0 398 aa11.63□□□□□ -0.55
C9orf3-202ENST00000297979 TMEM186Q96B77 213 aa11.63□□□□□ -0.55
C9orf3-202ENST00000297979 CIB3Q96Q77 187 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-202ENST00000297979 MRPL20Q9BYC9 149 aaKnown RBP11.63□□□□□ -0.55
C9orf3-202ENST00000297979 DOCK11Q5JSL3 2073 aa11.63□□□□□ -0.55
C9orf3-202ENST00000297979 DFFBO76075 338 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 F12P00748 615 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-202ENST00000297979 RBP4P02753 201 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 ZDHHC16Q969W1 377 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 SAT2Q96F10 170 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-202ENST00000297979 CITED1Q99966 193 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 TCEAL7Q9BRU2 100 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 CEBPZOSA8MTT3 80 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 HRASP01112 189 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 GNB2P62879 340 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 HBG1P69891 147 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 HBG2P69892 147 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 POU2AF1Q16633 256 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 STPG2Q8N412 459 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 SH3BGRL3Q9H299 93 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 PATZ1Q9HBE1 687 aaKnown RBP11.62□□□□□ -0.55
C9orf3-202ENST00000297979 PLA2G2EQ9NZK7 142 aa11.62□□□□□ -0.55
C9orf3-202ENST00000297979 LRBAP50851 2863 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 APOA2P02652 100 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 CLEC3BP05452 202 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 ZNF137PP52743 207 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 RELBQ01201 579 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 OR13D1Q8NGV5 346 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 CACNG8Q8WXS5 425 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 HIF1ANQ9NWT6 349 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 CACFD1Q9UGQ2 172 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 CFAP46Q8IYW2 2715 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 IFNA17P01571 189 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 GPR6P46095 362 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-202ENST00000297979 EFNA4P52798 201 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 OR4A47Q6IF82 309 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 EIF4E3Q8N5X7 224 aaKnown RBP11.61□□□□□ -0.55
C9orf3-202ENST00000297979 LY6G5BQ8NDX9 201 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 OR52E5Q8NH55 327 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
C9orf3-202ENST00000297979 NDUFS7O75251 213 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 IGKV1-16P04430 117 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 FGF2P09038 288 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 IL3RAP26951 378 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 GAGE1Q13065 139 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 SPINK9Q5DT21 86 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 HAPLN4Q86UW8 402 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 ST6GALNAC6Q969X2 333 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 STRAPQ9Y3F4 350 aaKnown RBP11.6□□□□□ -0.55
C9orf3-202ENST00000297979 IGHV2-26A0A0B4J1V2 119 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 TRAV3A0A0B4J244 114 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 FAM74A7A6NL05 159 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 H0YJW9 148 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 ATP6V0CP27449 155 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 REG1BP48304 166 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 ARL16Q0P5N6 197 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 FAM74A3Q4VXF1 159 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 ZNF429Q86V71 674 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 ZNF843Q8N446 348 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 OR5AN1Q8NGI8 311 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 OR4C12Q96R67 309 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 TSNAXQ99598 290 aaKnown RBP11.6□□□□□ -0.55
C9orf3-202ENST00000297979 TMEM208Q9BTX3 173 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 SSBP3Q9BWW4 388 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-202ENST00000297979 MALRD1Q5VYJ5 2156 aa11.6□□□□□ -0.55
C9orf3-202ENST00000297979 CXorf65A6NEN9 183 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 C15orf61A6NNL5 157 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 BLOC1S1P78537 153 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 PDLIM3Q53GG5 364 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-202ENST00000297979 NABP2Q9BQ15 211 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 A8MXK9 166 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 IFNA5P01569 189 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 ZNF525Q8N782 197 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 OSR1Q8TAX0 266 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-202ENST00000297979 GNPNAT1Q96EK6 184 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-202ENST00000297979 CLEC7AQ9BXN2 247 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 ONECUT1Q9UBC0 465 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 FOXA2Q9Y261 457 aaPredicted RBP11.59□□□□□ -0.55
C9orf3-202ENST00000297979 CBY3A6NI87 242 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 RAB5CP51148 216 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 DIAPH2-AS1Q14236 149 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 ATRAIDQ6UW56 229 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 RBMXL1Q96E39 390 aaKnown RBP11.59□□□□□ -0.55
C9orf3-202ENST00000297979 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 PARP11Q9NR21 331 aa11.59□□□□□ -0.55
C9orf3-202ENST00000297979 OVOL3O00110 214 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 SLC38A11Q08AI6 406 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 TMEM182Q6ZP80 229 aaPredicted RBP11.58□□□□□ -0.56
C9orf3-202ENST00000297979 Q6ZRG5 221 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 STXBP6Q8NFX7 210 aa11.58□□□□□ -0.56
C9orf3-202ENST00000297979 OR2G3Q8NGZ4 309 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms