RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PPIHO43447 177 aaKnown RBP10.11□□□□□ -0.79
SHROOM3-201ENST00000296043 GZMBP10144 247 aa10.11□□□□□ -0.79
SHROOM3-201ENST00000296043 TSPOP30536 169 aa10.11□□□□□ -0.79
SHROOM3-201ENST00000296043 TMEM187Q14656 261 aa10.11□□□□□ -0.79
SHROOM3-201ENST00000296043 PKD1L3Q7Z443 1732 aa10.11□□□□□ -0.79
SHROOM3-201ENST00000296043 CDIPTO14735 213 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 NKX2-2O95096 273 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 CBLN3Q6UW01 205 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 NYNRINQ9P2P1 1898 aaKnown RBP10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 LY75O60449 1722 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 TNFAIP6P98066 277 aaPredicted RBP10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 TBR1Q16650 682 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 VSTM2LQ96N03 204 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 FRMPD3Q5JV73 1810 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 SS18L1O75177 396 aaPredicted RBP10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 ZADH2Q8N4Q0 377 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 SERTM1A2A2V5 107 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 MPV17L2Q567V2 206 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 LINC00596Q86U02 117 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 ZNF714Q96N38 554 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 LOXL2Q9Y4K0 774 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 PEX7O00628 323 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 C1orf43Q9BWL3 253 aa10.1□□□□□ -0.79
SHROOM3-201ENST00000296043 TRAV30A0A087WSZ9 112 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 DPM2O94777 84 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 AZU1P20160 251 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 SEPSECSQ9HD40 501 aaKnown RBP10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 TCFL5Q9UL49 500 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 EDIL3O43854 480 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 NRTNQ99748 197 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 A0A1B0GUT8 65 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 ID1P41134 155 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 LOC285556D6RIA3 1793 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 MFAP4P55083 255 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 PSG3Q16557 428 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 IL23AQ9NPF7 189 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 KLF12Q9Y4X4 402 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 ADRA2AP08913 450 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 UNC119Q13432 240 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 WIPI1Q5MNZ9 446 aaPredicted RBP10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 DNM1P46Q6ZS02 220 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 RAB1CQ92928 201 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 SIPA1L3O60292 1781 aaPredicted RBP10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 PGLYRP1O75594 196 aaPredicted RBP10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 C1QTNF9P0C862 333 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 ATP5G3P48201 142 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 ATXN8Q156A1 80 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 PARP14Q460N5 1801 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 FOXI3A8MTJ6 420 aaPredicted RBP10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 C1QCP02747 245 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 FSTP19883 344 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 SRSF8Q9BRL6 282 aaKnown RBP10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 SDF2L1Q9HCN8 221 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 RPL23P62829 140 aaKnown RBP10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 TMEM56-RWDD3S4R434 201 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 NKX2-8O15522 239 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 GZMMP51124 257 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 NPIPB3Q92617 1050 aa10.09□□□□□ -0.79
SHROOM3-201ENST00000296043 METTL26Q96S19 204 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 PHLPP1O60346 1717 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 LRRC61Q9BV99 259 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 SNHG12Q9BXW3 62 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 ZNF815PA8K554 130 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 C8orf88P0DMB2 117 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 C10orf35Q96D05 121 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 REG4Q9BYZ8 158 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 THAP10Q9P2Z0 257 aaPredicted RBP10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 CGAP01215 116 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 CA7P43166 264 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 FOXL1Q12952 345 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 FER1L6-AS1Q8NA97 138 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 RAB1BQ9H0U4 201 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 F2RL2O00254 374 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 ZG16O60844 167 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 DEFB103AP81534 67 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 INSIG2Q9Y5U4 225 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 ARID2Q68CP9 1835 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 TRBV5-5A0A0J9YX44 114 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 AGRNO00468 2067 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 A8MWP6 167 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 ATG4DQ86TL0 474 aaPredicted RBP10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 GATAD1Q8WUU5 269 aa10.08□□□□□ -0.8
SHROOM3-201ENST00000296043 EVI2AP22794 236 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 RND2P52198 227 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 KIR3DL3Q8N743 410 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 LRTM2Q8N967 370 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 NHSQ6T4R5 1651 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 TRBV5-3A0A0A0MS03 114 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 NPC2P61916 151 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 MRPS18AQ9NVS2 196 aaKnown RBP10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 IL2RAP01589 272 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 LIPT2A6NK58 231 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 RPL27AP46776 148 aaKnown RBP10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 ZNF818PQ6ZRF7 136 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 PRSS47A8MTI9 375 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 ATP5IP56385 69 aaPredicted RBP10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 TMPRSS3P57727 454 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 TEX38Q6PEX7 206 aa10.07□□□□□ -0.8
SHROOM3-201ENST00000296043 ZNF645Q8N7E2 425 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms