RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CD40LGP29965 261 aa20.97■□□□□ 0.95
SSU72-201ENST00000291386 RPL27AP46776 148 aaKnown RBP20.97■□□□□ 0.95
SSU72-201ENST00000291386 TREML4Q6UXN2 200 aa20.97■□□□□ 0.95
SSU72-201ENST00000291386 LCNL1Q6ZST4 164 aa20.97■□□□□ 0.95
SSU72-201ENST00000291386 TMEM230Q96A57 120 aa20.97■□□□□ 0.95
SSU72-201ENST00000291386 UBE2E2Q96LR5 201 aa20.97■□□□□ 0.95
SSU72-201ENST00000291386 TSC22D3Q99576 134 aa20.97■□□□□ 0.95
SSU72-201ENST00000291386 SLA2Q9H6Q3 261 aa20.97■□□□□ 0.95
SSU72-201ENST00000291386 TEX13DA0A0J9YY54 714 aaPredicted RBP20.96■□□□□ 0.95
SSU72-201ENST00000291386 ZNF695Q8IW36 515 aa20.96■□□□□ 0.95
SSU72-201ENST00000291386 ZNF491Q8N8L2 437 aa20.96■□□□□ 0.95
SSU72-201ENST00000291386 FAM110DQ8TAY7 271 aaPredicted RBP20.96■□□□□ 0.95
SSU72-201ENST00000291386 GALNT14Q96FL9 552 aa20.96■□□□□ 0.95
SSU72-201ENST00000291386 TMEM222Q9H0R3 208 aa20.96■□□□□ 0.95
SSU72-201ENST00000291386 TEX22C9J3V5 150 aa20.95■□□□□ 0.94
SSU72-201ENST00000291386 E7EUB6 86 aa20.95■□□□□ 0.94
SSU72-201ENST00000291386 ATG12O94817 140 aa20.95■□□□□ 0.94
SSU72-201ENST00000291386 OR5AC1P0C628 307 aa20.95■□□□□ 0.94
SSU72-201ENST00000291386 DHODHQ02127 395 aa20.95■□□□□ 0.94
SSU72-201ENST00000291386 SP6Q3SY56 376 aa20.95■□□□□ 0.94
SSU72-201ENST00000291386 SGPP2Q8IWX5 399 aa20.95■□□□□ 0.94
SSU72-201ENST00000291386 TTC9CQ8N5M4 171 aa20.95■□□□□ 0.94
SSU72-201ENST00000291386 ADAD2Q8NCV1 583 aaKnown RBP20.95■□□□□ 0.94
SSU72-201ENST00000291386 GLYATL2Q8WU03 294 aa20.95■□□□□ 0.94
SSU72-201ENST00000291386 A0A1B0GW64 132 aa20.94■□□□□ 0.94
SSU72-201ENST00000291386 CENPXA8MT69 81 aa20.94■□□□□ 0.94
SSU72-201ENST00000291386 CDS2O95674 445 aa20.94■□□□□ 0.94
SSU72-201ENST00000291386 OR9G9P0C7N8 305 aa20.94■□□□□ 0.94
SSU72-201ENST00000291386 OR2B8PP59922 312 aa20.94■□□□□ 0.94
SSU72-201ENST00000291386 OR5T1Q8NG75 326 aa20.94■□□□□ 0.94
SSU72-201ENST00000291386 WDR12Q9GZL7 423 aaKnown RBP20.94■□□□□ 0.94
SSU72-201ENST00000291386 COMMD5Q9GZQ3 224 aa20.94■□□□□ 0.94
SSU72-201ENST00000291386 VWFP04275 2813 aa20.94■□□□□ 0.94
SSU72-201ENST00000291386 CGB1A6NKQ9 187 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 SNAPC5O75971 98 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 P0C879 139 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 RBMS2Q15434 407 aaKnown RBP20.93■□□□□ 0.94
SSU72-201ENST00000291386 TRIM16LQ309B1 348 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 THOC7Q6I9Y2 204 aaKnown RBP20.93■□□□□ 0.94
SSU72-201ENST00000291386 C18orf65Q6ZTR6 163 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 H2BFWTQ7Z2G1 175 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 KLHL30-AS1Q8NEE0 82 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 C4orf3Q8WVX3 66 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 SRSF8Q9BRL6 282 aaKnown RBP20.93■□□□□ 0.94
SSU72-201ENST00000291386 PRNDQ9UKY0 176 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 KCNIP3Q9Y2W7 256 aa20.93■□□□□ 0.94
SSU72-201ENST00000291386 IGKV1-5P01602 117 aa20.92■□□□□ 0.94
SSU72-201ENST00000291386 MYOD1P15172 320 aa20.92■□□□□ 0.94
SSU72-201ENST00000291386 SLC25A42Q86VD7 318 aa20.92■□□□□ 0.94
SSU72-201ENST00000291386 FYTTD1Q96QD9 318 aaKnown RBP20.92■□□□□ 0.94
SSU72-201ENST00000291386 FKBP11Q9NYL4 201 aa20.92■□□□□ 0.94
SSU72-201ENST00000291386 PKD1L1Q8TDX9 2849 aa20.92■□□□□ 0.94
SSU72-201ENST00000291386 HMX3A6NHT5 357 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 C15orf61A6NNL5 157 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 NPIPB5A8MRT5 1133 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 NUDT19A8MXV4 375 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 PLA2G10O15496 165 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 BTCP35070 178 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 RUNX1Q01196 453 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 ZNF846Q147U1 533 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 C8orf86Q6ZUL3 223 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 TMEM56Q96MV1 263 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 TMEM14BQ9NUH8 114 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 TMEM56-RWDD3S4R434 201 aa20.91■□□□□ 0.94
SSU72-201ENST00000291386 CMYA5Q8N3K9 4069 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 TEX50A0A1B0GTY4 177 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 NDUFB6O95139 128 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 CRYGCP07315 174 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 APELAP0DMC3 54 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 AKR1C4P17516 323 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 CCR6P51684 374 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 SUPT4H1P63272 117 aaKnown RBP20.9■□□□□ 0.94
SSU72-201ENST00000291386 TMEM187Q14656 261 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 TMEM128Q5BJH2 165 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 OR1L8Q8NGR8 309 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 OR5B3Q8NH48 314 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 CASTOR1Q8WTX7 329 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 IL22RA2Q969J5 263 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 MS4A10Q96PG2 267 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 QTRT1Q9BXR0 403 aaKnown RBP20.9■□□□□ 0.94
SSU72-201ENST00000291386 COA4Q9NYJ1 87 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 ZNF257Q9Y2Q1 563 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 NSG2Q9Y328 171 aa20.9■□□□□ 0.94
SSU72-201ENST00000291386 LINC00854A0A1B0GVQ3 168 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 TRGV3P03979 118 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 MYCNOSP40205 109 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 TPPP2P59282 170 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 KLK9Q2XQG4 91 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 ETV3LQ6ZN32 361 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 FAM219AQ8IW50 185 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 LHFPL5Q8TAF8 219 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 RBPMSQ93062 196 aaKnown RBP20.89■□□□□ 0.93
SSU72-201ENST00000291386 NDUFA4L2Q9NRX3 87 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 ZNF355PQ9NSJ1 428 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 KLK9Q9UKQ9 250 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 OR51B2Q9Y5P1 312 aa20.89■□□□□ 0.93
SSU72-201ENST00000291386 I3L521 148 aa20.88■□□□□ 0.93
SSU72-201ENST00000291386 TRAPPC2P0DI81 140 aa20.88■□□□□ 0.93
SSU72-201ENST00000291386 TRAPPC2BP0DI82 140 aa20.88■□□□□ 0.93
SSU72-201ENST00000291386 PSMB6P28072 239 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms