RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 NPVFQ9HCQ7 196 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 TP53TG3Q9ULZ0 132 aa10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 INTS1Q8N201 2190 aaKnown RBP10.93□□□□□ -0.66
SLC28A1-201ENST00000286749 YPEL1O60688 119 aa10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 YPEL2Q96QA6 119 aa10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 TBX15Q96SF7 602 aa10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 NEU1Q99519 415 aa10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 CD59P13987 128 aa10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 KIR2DL2P43627 348 aaPredicted RBP10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 LOXL3P58215 753 aa10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 RHOBP62745 196 aa10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 GUSBP1Q15486 140 aa10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 ZCCHC14Q8WYQ9 949 aaKnown RBP10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 MRPL18Q9H0U6 180 aaKnown RBP10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 IL36BQ9NZH7 164 aa10.92□□□□□ -0.66
SLC28A1-201ENST00000286749 TNFSF10P50591 281 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 LINC00310P59036 64 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 SELENOTP62341 195 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 TEPPQ6URK8 271 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 C9orf106Q8NAJ2 232 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 ZNRF1Q8ND25 227 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 CHODLQ9H9P2 273 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 IGHV2OR16-5A0A0B4J2B6 119 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 NPY1RP25929 384 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 Q6ZWC4 215 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 OR4P4Q8NGL7 312 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 OR1L6Q8NGR2 347 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 DSCAML1Q8TD84 2053 aa10.91□□□□□ -0.66
SLC28A1-201ENST00000286749 TRGV8A0A0C4DH27 118 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 C15orf61A6NNL5 157 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 SRRM5B3KS81 715 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 M0R143 59 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 MGST3O14880 152 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 SERF1AO75920 110 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 FRMD6-AS1P0C7T7 363 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 CRISP2P16562 243 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 ZNF124Q15973 351 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 MBNL2Q5VZF2 373 aaKnown RBP10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 TOMM20LQ6UXN7 152 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 SLC24A4Q8NFF2 622 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 OR4S2Q8NH73 311 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 DDB2Q92466 427 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 TMEM106BQ9NUM4 274 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 IGHV1-18A0A0C4DH31 117 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 F2RL2O00254 374 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 CACNA1GO43497 2377 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 DSCAMO60469 2012 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 ACTL6BO94805 426 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 CGAP01215 116 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 MYOD1P15172 320 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 IGFBP2P18065 325 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 TPPP2P59282 170 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 HES3Q5TGS1 186 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 LRP11Q86VZ4 500 aa10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 OPN3Q9H1Y3 402 aaPredicted RBP10.9□□□□□ -0.66
SLC28A1-201ENST00000286749 TANC2Q9HCD6 1990 aa10.9□□□□□ -0.67
SLC28A1-201ENST00000286749 MT-CO2P00403 227 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 CA2P00918 260 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 FOSL1P15407 271 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 KIR2DS2P43631 304 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 IER3P46695 156 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 LGALS4P56470 323 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 OR5I1Q13606 314 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 KRTCAP3Q53RY4 240 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 SPRNQ5BIV9 151 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 OR4A47Q6IF82 309 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 GCSAMQ8N6F7 178 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 C1orf162Q8NEQ5 155 aaPredicted RBP10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 C11orf52Q96A22 123 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 EAF1Q96JC9 268 aaPredicted RBP10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 UHRF2Q96PU4 802 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 HINT2Q9BX68 163 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 CALYQ9NYX4 217 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 TRGV10A0A0A0MS01 117 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 F2Z2F3 143 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 FCN1O00602 326 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 RPL29P47914 159 aaKnown RBP10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 MSMPQ1L6U9 139 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 ALKBH2Q6NS38 261 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 MIR17HGQ75NE6 70 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 PPP1R35Q8TAP8 253 aa10.89□□□□□ -0.67
SLC28A1-201ENST00000286749 TRAV9-1A0A075B6T8 112 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 A8MXE2 369 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 C9JCJ5 164 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 IGLV1-44P01699 117 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 IGHG3P01860 377 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 RAB4AP20338 218 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 RAB31Q13636 194 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 RPEL1Q2QD12 228 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 CR1LQ2VPA4 569 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 TDRG1Q3Y452 100 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 MMD2Q8IY49 270 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 FAM122AQ96E09 287 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 HSPB9Q9BQS6 159 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 ENY2Q9NPA8 101 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 TUBG2Q9NRH3 451 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 CADP27708 2225 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 SAA2-SAA4A0A096LPE2 208 aa10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 SAA2P0DJI9 122 aaPredicted RBP10.88□□□□□ -0.67
SLC28A1-201ENST00000286749 G0S2P27469 103 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms