RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 A0A1W2PQM1 296 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 EREGO14944 169 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 PCOLCEQ15113 449 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 C1orf174Q8IYL3 243 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 NPCDR1Q9BY65 106 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 WNT9BO14905 357 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 TMEM54Q969K7 222 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 SPTBN2O15020 2390 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 NKX2-8O15522 239 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 ST6GALNAC6Q969X2 333 aa13.98□□□□□ -0.17
SH3RF1-201ENST00000284637 COL11A1P12107 1806 aaPredicted RBP13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 MPZP25189 248 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 PTGDSP41222 190 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 TM2D1Q9BX74 207 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 JPT1Q9UK76 154 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 ANKRD31Q8N7Z5 1873 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 DOCK3Q8IZD9 2030 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 ZNF324O75467 553 aaPredicted RBP13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 LOXL3P58215 753 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 UBE2V1Q13404 147 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 HIST1H4GQ99525 98 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 TFF3Q07654 80 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 RPL39P5Q59GN2 51 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 OR5P3Q8WZ94 311 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 PLXNB2O15031 1838 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 TRAV9-2A0A087WT02 112 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 GZMBP10144 247 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 AREGP15514 252 aa13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 MBNL2Q5VZF2 373 aaKnown RBP13.97□□□□□ -0.17
SH3RF1-201ENST00000284637 A0A1B0GW64 132 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 PRR33A8MZF0 331 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 COX5BP10606 129 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 PEAR1Q5VY43 1037 aaPredicted RBP13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 LINC00114Q6XXX2 140 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 GOLT1AQ6ZVE7 132 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 KLK15Q9H2R5 256 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 NCOR1P1Q9H4R4 102 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 J3QRE1 110 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 UCP1P25874 307 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 C16orf92Q96LL3 132 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 IL6RP08887 468 aaPredicted RBP13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 C1orf185Q5T7R7 199 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 ZNRF1Q8ND25 227 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 PRR7Q8TB68 274 aa13.96□□□□□ -0.17
SH3RF1-201ENST00000284637 PRR32B1ATL7 298 aa13.96□□□□□ -0.18
SH3RF1-201ENST00000284637 RNFT1Q5M7Z0 435 aa13.96□□□□□ -0.18
SH3RF1-201ENST00000284637 PNKDQ8N490 385 aa13.96□□□□□ -0.18
SH3RF1-201ENST00000284637 HEATR5BQ9P2D3 2071 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 CHD5Q8TDI0 1954 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 CCL20P78556 96 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 MAP1LC3AQ9H492 121 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 KLF2Q9Y5W3 355 aaPredicted RBP13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 hCG_38984A0A1B0GV85 526 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 MOSP00540 346 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 FAM19A2Q8N3H0 131 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 ORAOV1Q8WV07 137 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 C7orf71A4D174 169 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 CGAP01215 116 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 RFPL3SP0C7P2 107 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 C5orf30Q96GV9 206 aa13.95□□□□□ -0.18
SH3RF1-201ENST00000284637 IGFBP3P17936 291 aaPredicted RBP13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 ATP5G3P48201 142 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 SEMA5BQ9P283 1151 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 ARHGEF17Q96PE2 2063 aaPredicted RBP13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 DOPEY2Q9Y3R5 2298 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 A0A1B0GWB2 263 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 C12orf77C9JDV5 145 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 H3BUT2 72 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 ADMP35318 185 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 GPR6P46095 362 aaPredicted RBP13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 SAP25Q8TEE9 199 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 IGHV3-35A0A0C4DH35 117 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 LDLRAD4O15165 306 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 UMODP07911 640 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 GATAD1Q8WUU5 269 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 ZNF837Q96EG3 531 aaPredicted RBP13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 SCO2A0A1W2PP80 73 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 SFXN3Q9BWM7 321 aa13.94□□□□□ -0.18
SH3RF1-201ENST00000284637 C17orf98A8MV24 154 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 CA1P00915 261 aaPredicted RBP13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 ANOS1P23352 680 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 PCSK4Q6UW60 755 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 SNAI2O43623 268 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 GPR183P32249 361 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 CA7P43166 264 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 OR4C13Q8NGP0 309 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 AHRRA9YTQ3 701 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 OR5A1Q8NGJ0 315 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 DIRC2Q96SL1 478 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 SPTBN1Q01082 2364 aaKnown RBP13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 TRIOBPQ9H2D6 2365 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 KIF26BQ2KJY2 2108 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 CCL21O00585 134 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 SYNGR3O43761 229 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 PRSS2P07478 247 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 ZNF146Q15072 292 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 OR10J6PQ8NGY7 276 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 C19orf24Q9BVV8 132 aa13.93□□□□□ -0.18
SH3RF1-201ENST00000284637 ID1P41134 155 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms