RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TMEM171Q8WVE6 324 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 USB1Q9BQ65 265 aaKnown RBP12.01□□□□□ -0.49
TMEM47-201ENST00000275954 SMDT1Q9H4I9 107 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 VSIRQ9H7M9 311 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 TMEM131Q92545 1883 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 SEC14L6B5MCN3 397 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 SS18L1O75177 396 aaPredicted RBP12.01□□□□□ -0.49
TMEM47-201ENST00000275954 LY6HO94772 140 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 CT45A10P0DMU9 189 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 GTF3AQ92664 365 aaKnown RBP12.01□□□□□ -0.49
TMEM47-201ENST00000275954 WFIKKN1Q96NZ8 548 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 TXN2Q99757 166 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 JPT1Q9UK76 154 aa12.01□□□□□ -0.49
TMEM47-201ENST00000275954 IGHV1-18A0A0C4DH31 117 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 FAM90A26D6RGX4 464 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 H3BTX0 84 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 SRP19P09132 144 aaKnown RBP12□□□□□ -0.49
TMEM47-201ENST00000275954 CCL3L1P16619 93 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 MMDQ15546 238 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 ZNF525Q8N782 197 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 PARLQ9H300 379 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 CHODLQ9H9P2 273 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 SIRT7Q9NRC8 400 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 HELTA6NFD8 242 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 B4DEV8 164 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 CHEK1O14757 476 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 ARL14EPLP0DKL9 152 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 GATA2P23769 480 aaPredicted RBP12□□□□□ -0.49
TMEM47-201ENST00000275954 PAX5Q02548 391 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 RAB1CQ92928 201 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 TIMM9Q9Y5J7 89 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 RPL30P62888 115 aaKnown RBP12□□□□□ -0.49
TMEM47-201ENST00000275954 Q6ZRM9 215 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 OR1L4Q8NGR5 311 aa12□□□□□ -0.49
TMEM47-201ENST00000275954 IGKV1-6A0A0C4DH72 117 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 HSBP1L1C9JCN9 74 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 K7EQM0 130 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 HSBP1O75506 76 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 CXorf1O96002 111 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 ARL3P36405 182 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 IER3P46695 156 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 Q56UQ5 140 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 TOMM20LQ6UXN7 152 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 S100A7AQ86SG5 101 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 PACRGQ96M98 296 aaPredicted RBP11.99□□□□□ -0.49
TMEM47-201ENST00000275954 MS4A10Q96PG2 267 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 IDI2-AS1Q9NZ38 188 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 SERTM2A0A1B0GWG4 89 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 MRPL37Q9BZE1 423 aaKnown RBP11.99□□□□□ -0.49
TMEM47-201ENST00000275954 SEBOXQ9HB31 216 aaPredicted RBP11.99□□□□□ -0.49
TMEM47-201ENST00000275954 RPL8P62917 257 aaKnown RBP11.99□□□□□ -0.49
TMEM47-201ENST00000275954 GCSAMQ8N6F7 178 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 LRTM2Q8N967 370 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 RAB1BQ9H0U4 201 aa11.99□□□□□ -0.49
TMEM47-201ENST00000275954 IFNL4K9M1U5 179 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 RRHO14718 337 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 LINC00869P0C866 280 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 CDKN1AP38936 164 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 LRRC75BQ2VPJ9 315 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 KHDC1LQ5JSQ8 128 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 DPPA3Q6W0C5 159 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 LURAP1Q96LR2 239 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 SRD5A3Q9H8P0 318 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 C9JQL5 133 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 K7ENP7 123 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 CSN1S1P47710 185 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 GCSAMLQ5JQS6 135 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 LINC00518Q8N0U6 118 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 NHLRC2Q8NBF2 726 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 SFXN3Q9BWM7 321 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 TMEM167BQ9NRX6 74 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 ZDHHC8Q9ULC8 765 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 COL8A1P27658 744 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 UQCRFS1P47985 274 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 ARF6P62330 175 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 BSPH1Q075Z2 132 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 C1orf174Q8IYL3 243 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 OR51G1Q8NGK1 321 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 NPCDR1Q9BY65 106 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 ZNF586Q9NXT0 402 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 KIAA1549LQ6ZVL6 1849 aa11.98□□□□□ -0.49
TMEM47-201ENST00000275954 CEACAM18A8MTB9 384 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 IGKV1-5P01602 117 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 IL19Q9UHD0 177 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 TNCP24821 2201 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 IGHV3OR16-10A0A075B7F0 116 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 LOC102723971A0A1B0GUV8 181 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 GATCO43716 136 aaKnown RBP11.97□□□□□ -0.49
TMEM47-201ENST00000275954 KBTBD11O94819 623 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 CA2P00918 260 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 RND2P52198 227 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 STARD4Q96DR4 205 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 PDE6DO43924 150 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 CLN5O75503 358 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 CLEC3BP05452 202 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 CRISP2P16562 243 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 ADCYAP1P18509 176 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 NMSQ5H8A3 153 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 DOLPP1Q86YN1 238 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 TCTEX1D1Q8N7M0 179 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms