RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 C10orf35Q96D05 121 aa10.72□□□□□ -0.69
HERC6-202ENST00000273960 TMEM38BQ9NVV0 291 aa10.72□□□□□ -0.69
HERC6-202ENST00000273960 A0A087X0K7 114 aa10.72□□□□□ -0.69
HERC6-202ENST00000273960 LINC00696Q6ZRV3 163 aa10.72□□□□□ -0.69
HERC6-202ENST00000273960 GCNT2Q8N0V5 402 aa10.72□□□□□ -0.69
HERC6-202ENST00000273960 SARAFQ96BY9 339 aa10.72□□□□□ -0.69
HERC6-202ENST00000273960 SPACA9Q96E40 222 aaPredicted RBP10.72□□□□□ -0.69
HERC6-202ENST00000273960 REPIN1Q9BWE0 567 aaKnown RBP10.72□□□□□ -0.69
HERC6-202ENST00000273960 KCNIP2Q9NS61 270 aa10.72□□□□□ -0.69
HERC6-202ENST00000273960 FAM166BA8MTA8 275 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 BMPR1BO00238 502 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 GNG4P50150 75 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 EBLN2Q6P2I7 272 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 ASCL4Q6XD76 172 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 MRPL52Q86TS9 123 aaKnown RBP10.71□□□□□ -0.69
HERC6-202ENST00000273960 UBALD2Q8IYN6 164 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 TMEM54Q969K7 222 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.71□□□□□ -0.69
HERC6-202ENST00000273960 DYSFO75923 2080 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 CUL9Q8IWT3 2517 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 CER1O95813 267 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 SLAQ13239 276 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 C10orf128Q5T292 105 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 LINC00173Q6ZV60 143 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 CSTL1Q9H114 145 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 FNDC4Q9H6D8 234 aaPredicted RBP10.71□□□□□ -0.69
HERC6-202ENST00000273960 HSPB7Q9UBY9 170 aa10.71□□□□□ -0.69
HERC6-202ENST00000273960 GAGE12BA1L429 117 aa10.71□□□□□ -0.7
HERC6-202ENST00000273960 FBLL1A6NHQ2 334 aaKnown RBP10.71□□□□□ -0.7
HERC6-202ENST00000273960 LRRC30A6NM36 301 aa10.71□□□□□ -0.7
HERC6-202ENST00000273960 APCSP02743 223 aa10.71□□□□□ -0.7
HERC6-202ENST00000273960 SSTR5P35346 364 aa10.71□□□□□ -0.7
HERC6-202ENST00000273960 TMEM108Q6UXF1 575 aa10.71□□□□□ -0.7
HERC6-202ENST00000273960 SPATA12Q7Z6I5 190 aa10.71□□□□□ -0.7
HERC6-202ENST00000273960 FAM216AQ8WUB2 273 aa10.71□□□□□ -0.7
HERC6-202ENST00000273960 LSM10Q969L4 123 aaKnown RBP10.71□□□□□ -0.7
HERC6-202ENST00000273960 LINC00479Q96M42 142 aa10.71□□□□□ -0.7
HERC6-202ENST00000273960 RIPPLY2Q5TAB7 128 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 FAM168AQ92567 244 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 STRADBQ9C0K7 418 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 CDC42EP3Q9UKI2 254 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 IGLC7A0M8Q6 106 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 TOMM40O96008 361 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 MFAP2P55001 183 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 TMEM42Q69YG0 159 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 TRAT1Q6PIZ9 186 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 NFAM1Q8NET5 270 aaPredicted RBP10.7□□□□□ -0.7
HERC6-202ENST00000273960 MRGPRDQ8TDS7 321 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 EAF1Q96JC9 268 aaPredicted RBP10.7□□□□□ -0.7
HERC6-202ENST00000273960 ZNF430Q9H8G1 570 aaPredicted RBP10.7□□□□□ -0.7
HERC6-202ENST00000273960 ZNF331Q9NQX6 463 aaPredicted RBP10.7□□□□□ -0.7
HERC6-202ENST00000273960 OR7C2O60412 319 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 GRPP07492 148 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 PSG5Q15238 335 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 WDR54Q9H977 334 aa10.7□□□□□ -0.7
HERC6-202ENST00000273960 ACACAQ13085 2346 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 ASPMQ8IZT6 3477 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 HELTA6NFD8 242 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 RNF212BA8MTL3 300 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 PPIAL4DF5H284 164 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 TMPRSS2O15393 492 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 GNG7O60262 68 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 RAC2P15153 192 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 NPY1RP25929 384 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 SSR4P51571 173 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 SSX8Q7RTT4 187 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 MS4A5Q9H3V2 200 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 TIMM9Q9Y5J7 89 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 YLPM1P49750 1951 aaKnown RBP10.69□□□□□ -0.7
HERC6-202ENST00000273960 TRAV30A0A087WSZ9 112 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 P04436 131 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 ZNF138P52744 262 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 PSG9Q00887 426 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 RAB37Q96AX2 223 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 PRRG4Q9BZD6 226 aa10.69□□□□□ -0.7
HERC6-202ENST00000273960 POLEQ07864 2286 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 TRAV9-2A0A087WT02 112 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 IGHV2-26A0A0B4J1V2 119 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 TRAV8-6A0A0B4J262 113 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 IGHV1-69-2A0A0G2JMI3 117 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 OR5B21A6NL26 309 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 CSN3P07498 182 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 Q0VG73 95 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 DHRS13Q6UX07 377 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 TMEM136Q6ZRR5 245 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 GSX1Q9H4S2 264 aaPredicted RBP10.68□□□□□ -0.7
HERC6-202ENST00000273960 PLEKHA3Q9HB20 300 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 ZNF355PQ9NSJ1 428 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 PCNX2A6NKB5 2137 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 OR4C46A6NHA9 309 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 DCAF12Q5T6F0 453 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 OR2D3Q8NGH3 330 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 LOXL2Q9Y4K0 774 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 PLCE1Q9P212 2302 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 A0A0G2JMM0 328 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 A0A1W2PPB8 328 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 KIR3DP1A8MWS1 328 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 TAX1BP3O14907 124 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 GCHFRP30047 84 aa10.68□□□□□ -0.7
HERC6-202ENST00000273960 ZNF137PP52743 207 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms