RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 ZNF488Q96MN9 340 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 AURKAIP1Q9NWT8 199 aaPredicted RBP10.5□□□□□ -0.73
PRPF6-201ENST00000266079 PAM16Q9Y3D7 125 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 TIMM9Q9Y5J7 89 aa10.5□□□□□ -0.73
PRPF6-201ENST00000266079 HCFC1P51610 2035 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 HECTD1Q9ULT8 2610 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 CTXND1A0A1B0GTU2 59 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
PRPF6-201ENST00000266079 TPPP2P59282 170 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 COTL1Q14019 142 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 Q6ZR03 302 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 OR2Z1Q8NG97 314 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 VAMP8Q9BV40 100 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 PIGBOS1A0A0B4J2F0 54 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 MLNRO43193 412 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 SERPINE2P07093 398 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 CD3EP07766 207 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 CD99P14209 185 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 GLRXP35754 106 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 KLF3P57682 345 aaPredicted RBP10.49□□□□□ -0.73
PRPF6-201ENST00000266079 SAPCD1Q5SSQ6 148 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 SLC25A22Q9H936 323 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 CACNG5Q9UF02 275 aa10.49□□□□□ -0.73
PRPF6-201ENST00000266079 NAPSAO96009 420 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 ADMP35318 185 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 SRSF1Q07955 248 aaKnown RBP eCLIP10.48□□□□□ -0.73
PRPF6-201ENST00000266079 PRAMEF6Q5VXH4 476 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 UBE2L5PA0A1B0GUS4 154 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 SHISA9B4DS77 424 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 PSG2P11465 335 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 FOXL1Q12952 345 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 ACSM6Q6P461 480 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 ZNF826PQ6ZT77 177 aa10.48□□□□□ -0.73
PRPF6-201ENST00000266079 IGKV1-6A0A0C4DH72 117 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 E7EQL1 145 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 SYNGR1O43759 233 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 CTXN2P0C2S0 81 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 S100GP29377 79 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 OR51H1Q8NH63 302 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 TP53TG3Q9ULZ0 132 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 KIR2DS1A0A191URI9 304 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 PAGE4O60829 102 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 RHBDL1O75783 438 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 ESDP10768 282 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 NPPCP23582 126 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 KIR2DS4P43632 304 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 YPEL3P61236 119 aaPredicted RBP10.47□□□□□ -0.73
PRPF6-201ENST00000266079 RBX1P62877 108 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 SLC38A11Q08AI6 406 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 KIR2DS1Q14954 304 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 ADIPOQQ15848 244 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 LINC01551Q86U37 167 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 ZNF611Q8N823 705 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 OR10V1Q8NGI7 309 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 LSM10Q969L4 123 aaKnown RBP10.47□□□□□ -0.73
PRPF6-201ENST00000266079 SLC35E1Q96K37 410 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 HSPB9Q9BQS6 159 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 ARFGEF3Q5TH69 2177 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 GRIFINA4D1Z8 144 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A10PA6NDY2 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A18PA6NE21 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A16PA6NEW6 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A20PA6NIJ5 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A8PA6NJQ4 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A7PA6NKC0 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A22PA8MWA6 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A12PA8MX19 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A5PA8MXJ8 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 DEFB108AA8MXU0 73 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A23PA8MXZ1 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 IQCF6A8MYZ5 107 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 CDIPTO14735 213 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A15PP0C7V4 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A13PP0C7W8 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A14PP0C7W9 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 FAM90A24PP0C7X0 464 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 CDKN1AP38936 164 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 SELENOTP62341 195 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 CEACAM21Q3KPI0 293 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 SPANXN5Q5MJ07 72 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 WDR86Q86TI4 376 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 VN1R17PQ8TDU5 208 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 OR5P3Q8WZ94 311 aa10.47□□□□□ -0.73
PRPF6-201ENST00000266079 DOCK11Q5JSL3 2073 aa10.46□□□□□ -0.73
PRPF6-201ENST00000266079 HS3ST1O14792 307 aa10.46□□□□□ -0.73
PRPF6-201ENST00000266079 LINC00310P59036 64 aa10.46□□□□□ -0.73
PRPF6-201ENST00000266079 SELENOVP59797 346 aa10.46□□□□□ -0.73
PRPF6-201ENST00000266079 TCF23Q7RTU1 214 aa10.46□□□□□ -0.73
PRPF6-201ENST00000266079 OR10G9Q8NGN4 311 aa10.46□□□□□ -0.73
PRPF6-201ENST00000266079 OR10G7Q8NGN6 311 aa10.46□□□□□ -0.73
PRPF6-201ENST00000266079 PATZ1Q9HBE1 687 aaKnown RBP10.46□□□□□ -0.73
PRPF6-201ENST00000266079 IL36RNQ9UBH0 155 aa10.46□□□□□ -0.73
PRPF6-201ENST00000266079 CSMD1Q96PZ7 3565 aa10.46□□□□□ -0.74
PRPF6-201ENST00000266079 NOTCH2Q04721 2471 aa10.46□□□□□ -0.74
PRPF6-201ENST00000266079 J3QW42 95 aa10.46□□□□□ -0.74
PRPF6-201ENST00000266079 IGKV1-39P01597 117 aa10.46□□□□□ -0.74
PRPF6-201ENST00000266079 IGKV1D-39P04432 117 aa10.46□□□□□ -0.74
PRPF6-201ENST00000266079 COL8A1P27658 744 aa10.46□□□□□ -0.74
PRPF6-201ENST00000266079 CCL8P80075 99 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms