RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 AKR1C3P42330 323 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 UBE2L3P68036 154 aaKnown RBP11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 FLI1Q01543 452 aaPredicted RBP11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 Q6ZSR3 168 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 TECRQ9NZ01 308 aaKnown RBP11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 PXMP4Q9Y6I8 212 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 RNF222A6NCQ9 220 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 H7BYZ3 331 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 CFHR2P36980 270 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 PSG5Q15238 335 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 LDLRAD3Q86YD5 345 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 PRORYQ9H606 182 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 EIF3GO75821 320 aaKnown RBP eCLIP11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 CA2P00918 260 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 SULT1A2P50226 295 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 GUSBP1Q15486 140 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 C11orf53Q8IXP5 236 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 SH3BGRL3Q9H299 93 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 CREBBPQ92793 2442 aa11.94□□□□□ -0.5
PDLIM2-201ENST00000265810 M0QZ24 198 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 TPPP3Q9BW30 176 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 SLC35B3Q9H1N7 401 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 SPRNQ5BIV9 151 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 MIC13Q5XKP0 118 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 FAM53AQ6NSI3 398 aaPredicted RBP11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 LRTM2Q8N967 370 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 FAM216AQ8WUB2 273 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 SSTP61278 116 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 TUSC1Q2TAM9 212 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 ZNF429Q86V71 674 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 CORTO00230 105 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 RBFOX2O43251 390 aaKnown RBP eCLIP11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 SOD3P08294 240 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 PF4V1P10720 104 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 KLRD1Q13241 179 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 C10orf113Q5VZT2 155 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 HSD17B13Q7Z5P4 300 aaPredicted RBP11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 PFDN5Q99471 154 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 ABCA1O95477 2261 aa11.93□□□□□ -0.5
PDLIM2-201ENST00000265810 CTXND1A0A1B0GTU2 59 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 PRR27Q6MZM9 219 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 TMEM88Q6PEY1 159 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 TIMM23O14925 209 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 MPDU1O75352 247 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 SLC35E3Q7Z769 313 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 MS4A10Q96PG2 267 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 LIME1Q9H400 295 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 MOSP00540 346 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 ID3Q02535 119 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 SSX3Q99909 188 aa11.92□□□□□ -0.5
PDLIM2-201ENST00000265810 LINC00473A8K010 186 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 SLC25A5P05141 298 aaKnown RBP11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 CD55P08174 381 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 FBP1P09467 338 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 CT45A10P0DMU9 189 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 CNN1P51911 297 aaKnown RBP11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 CLEC12BQ2HXU8 276 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 NECAP1Q8NC96 275 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 OR1L6Q8NGR2 347 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 RBM14Q96PK6 669 aaKnown RBP11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 AAMDCQ9H7C9 122 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 RNF24Q9Y225 148 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 OR9G9P0C7N8 305 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 LINC00869P0C866 280 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 SPP1P10451 314 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 DPF1Q92782 380 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 CYYR1Q96J86 154 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 RNF2Q99496 336 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 UPK2O00526 184 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 TMEM155Q4W5P6 130 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 Q8NFD4 153 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 NPIPB3Q92617 1050 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 TNFRSF14Q92956 283 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 TVP23CQ96ET8 276 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 P2RX4Q99571 388 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 ZNRD1Q9P1U0 126 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 ANAPC10Q9UM13 185 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 CSPG4Q6UVK1 2322 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 NPIPB11E5RHQ5 1161 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 NDUFS7O75251 213 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 OR2C1O95371 312 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 OR8I2Q8N0Y5 310 aa11.91□□□□□ -0.5
PDLIM2-201ENST00000265810 TRAV40A0A0B4J280 105 aa11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 PAGE4O60829 102 aa11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 GOSR1O95249 250 aa11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 FHITP49789 147 aa11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 TMEM167BQ9NRX6 74 aa11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 LINC00862A6NCI5 91 aa11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 HLA-DRB5Q30154 266 aa11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 SLC16A13Q7RTY0 426 aa11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 VMO1Q7Z5L0 202 aa11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 FAM103A1Q9BTL3 118 aaKnown RBP11.9□□□□□ -0.5
PDLIM2-201ENST00000265810 ZP3P21754 424 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 MSMPQ1L6U9 139 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 OR4D5Q8NGN0 318 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 C11orf94C9JXX5 98 aa11.89□□□□□ -0.51
PDLIM2-201ENST00000265810 IGKV1-5P01602 117 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms