RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 IMMP2LQ96T52 175 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 H0YJW9 148 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 TYMSP04818 313 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 LINC00869P0C866 280 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 AREGP15514 252 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 TMEM200BQ69YZ2 307 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 C11orf42Q8N5U0 333 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 VKORC1Q9BQB6 163 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 ARID1AO14497 2285 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 IGLV2-23P01705 113 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 ZNF709Q8N972 641 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 OR5B3Q8NH48 314 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 C11orf52Q96A22 123 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 SNRNP40Q96DI7 357 aaKnown RBP9.09□□□□□ -0.95
MSH3-201ENST00000265081 SLC25A10Q9UBX3 287 aaPredicted RBP9.09□□□□□ -0.95
MSH3-201ENST00000265081 F6UZH7 168 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 IRF2P14316 349 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 FABP9Q0Z7S8 132 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 ANAPC16Q96DE5 110 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 NEIL1Q96FI4 390 aaPredicted RBP9.08□□□□□ -0.96
MSH3-201ENST00000265081 NDUFA4L2Q9NRX3 87 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 OR51B2Q9Y5P1 312 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 ATMQ13315 3056 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 TEX50A0A1B0GTY4 177 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST1H2BKO60814 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 IGKV1-16P04430 117 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST1H2BJP06899 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST1H2BOP23527 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST1H2BBP33778 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST1H2BDP58876 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST1H2BCP62807 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST2H2BEQ16778 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.08□□□□□ -0.96
MSH3-201ENST00000265081 DNLZQ5SXM8 178 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 ADAM5Q6NVV9 412 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 C1orf87Q8N0U7 546 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 ABHD12Q8N2K0 398 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 OR51G1Q8NGK1 321 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST1H2BHQ93079 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 WFIKKN1Q96NZ8 548 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST1H2BNQ99877 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 HIST1H2BMQ99879 126 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 FKBP11Q9NYL4 201 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 PXMP4Q9Y6I8 212 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 PSMB11A5LHX3 300 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 NPY1RP25929 384 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 PAX2Q02962 417 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 RNASE6Q93091 150 aaKnown RBP9.08□□□□□ -0.96
MSH3-201ENST00000265081 CTSZQ9UBR2 303 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 CACNA1HO95180 2353 aa9.08□□□□□ -0.96
MSH3-201ENST00000265081 GGCTO75223 188 aaKnown RBP9.07□□□□□ -0.96
MSH3-201ENST00000265081 CXorf1O96002 111 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 CA2P00918 260 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 LOXP28300 417 aaPredicted RBP9.07□□□□□ -0.96
MSH3-201ENST00000265081 RPL35P42766 123 aaKnown RBP9.07□□□□□ -0.96
MSH3-201ENST00000265081 CDX1P47902 265 aaPredicted RBP9.07□□□□□ -0.96
MSH3-201ENST00000265081 TMEM155Q4W5P6 130 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 GCSAMLQ5JQS6 135 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 GFRALQ6UXV0 394 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 LYG1Q8N1E2 194 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 CISD2Q8N5K1 135 aaKnown RBP9.07□□□□□ -0.96
MSH3-201ENST00000265081 ZNF714Q96N38 554 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 SMIM7Q9BQ49 75 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 TMEM106BQ9NUM4 274 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 SLC45A2Q9UMX9 530 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 CGB1A6NKQ9 187 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 E7EQL1 145 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 CLN5O75503 358 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 GNB1P62873 340 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 RTL8BQ17RB0 113 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 SLC35E1Q96K37 410 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 TMEM204Q9BSN7 226 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 LY96Q9Y6Y9 160 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 PPIAL4EA0A075B759 164 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 PPIAL4DF5H284 164 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 PPIAL4FP0DN26 164 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 TEPPQ6URK8 271 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 SSX9Q7RTT3 188 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 ABHD5Q8WTS1 349 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 PLPPR2Q96GM1 343 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 HEYLQ9NQ87 328 aaPredicted RBP9.07□□□□□ -0.96
MSH3-201ENST00000265081 PPIAL4AQ9Y536 164 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 DCHS1Q96JQ0 3298 aa9.07□□□□□ -0.96
MSH3-201ENST00000265081 PAGE4O60829 102 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 IFNA10P01566 189 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 RNASE2P10153 161 aaKnown RBP9.06□□□□□ -0.96
MSH3-201ENST00000265081 SRP14P37108 136 aaKnown RBP9.06□□□□□ -0.96
MSH3-201ENST00000265081 COA6Q5JTJ3 125 aaKnown RBP9.06□□□□□ -0.96
MSH3-201ENST00000265081 SPNS3Q6ZMD2 512 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 TMEM144Q7Z5S9 345 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 PDPNQ86YL7 162 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 TMEM167AQ8TBQ9 72 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 FAM210BQ96KR6 192 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 SRD5A3Q9H8P0 318 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 SAA1P0DJI8 122 aaPredicted RBP9.06□□□□□ -0.96
MSH3-201ENST00000265081 C16orf82Q7Z2V1 217 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 SAP30LQ9HAJ7 183 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 ELOA3CA0A087WX78 387 aaPredicted RBP9.06□□□□□ -0.96
MSH3-201ENST00000265081 C11orf94C9JXX5 98 aa9.06□□□□□ -0.96
MSH3-201ENST00000265081 RBP4P02753 201 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms