RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 RCC1LQ96I51 464 aaKnown RBP15.28■□□□□ 0.04
COL5A3-201ENST00000264828 HS3ST3B1Q9Y662 390 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 C1QL2Q7Z5L3 287 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 PRELID3AQ96N28 172 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 TRAV24A0A0B4J272 114 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 OR11H12B2RN74 326 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 IGFBP2P18065 325 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 PTGDSP41222 190 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 OR11H1Q8NG94 326 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 OR11H2Q8NH07 326 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 IGHMP01871 453 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 WDR82Q6UXN9 313 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 RPRMQ9NS64 109 aa15.28■□□□□ 0.04
COL5A3-201ENST00000264828 ZNF729A6NN14 1252 aaPredicted RBP15.27■□□□□ 0.04
COL5A3-201ENST00000264828 TMEM186Q96B77 213 aa15.27■□□□□ 0.03
COL5A3-201ENST00000264828 ARID2Q68CP9 1835 aa15.27■□□□□ 0.03
COL5A3-201ENST00000264828 IGHV1-69-2A0A0G2JMI3 117 aa15.27■□□□□ 0.03
COL5A3-201ENST00000264828 SAP25Q8TEE9 199 aa15.27■□□□□ 0.03
COL5A3-201ENST00000264828 IL36BQ9NZH7 164 aa15.27■□□□□ 0.03
COL5A3-201ENST00000264828 BRWD1Q9NSI6 2320 aa15.27■□□□□ 0.03
COL5A3-201ENST00000264828 SFTPCP11686 197 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 NUP37Q8NFH4 326 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 DCTN5Q9BTE1 182 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 WDR90Q96KV7 1748 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 PROB1E7EW31 1015 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 LIPFP07098 398 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 ATP5G3P48201 142 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 UCP3P55916 312 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 TMPRSS3P57727 454 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 EGR4Q05215 589 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 ZNF362Q5T0B9 420 aaPredicted RBP15.26■□□□□ 0.03
COL5A3-201ENST00000264828 C10orf128Q5T292 105 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 C19orf24Q9BVV8 132 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 PRDM6Q9NQX0 595 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 CD8AP01732 235 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 FAM19A2Q8N3H0 131 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 WDYHV1Q96HA8 205 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 FGF5P12034 268 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 TSPOP30536 169 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 CEACAM4O75871 244 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 NDUFA3O95167 84 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 UCNP55089 124 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 MARVELD3Q96A59 401 aa15.26■□□□□ 0.03
COL5A3-201ENST00000264828 SDHCQ99643 169 aaPredicted RBP15.26■□□□□ 0.03
COL5A3-201ENST00000264828 TNFSF10P50591 281 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 SNRPD3P62318 126 aaKnown RBP15.25■□□□□ 0.03
COL5A3-201ENST00000264828 CACNG7P62955 275 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 KNL1Q8NG31 2342 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 SHISA3A0PJX4 238 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 NDUFA2O43678 99 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 TYMSP04818 313 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 LINC00469Q8N7U9 141 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 IGHV3OR16-8A0A075B7F1 116 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 FAM181AQ8N9Y4 354 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 SCARF2Q96GP6 870 aaPredicted RBP15.25■□□□□ 0.03
COL5A3-201ENST00000264828 PSMG3Q9BT73 122 aaPredicted RBP15.25■□□□□ 0.03
COL5A3-201ENST00000264828 FOXA2Q9Y261 457 aaPredicted RBP15.25■□□□□ 0.03
COL5A3-201ENST00000264828 RNF115Q9Y4L5 304 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 A0A1B0GWB2 263 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 CENPVQ7Z7K6 275 aaPredicted RBP15.25■□□□□ 0.03
COL5A3-201ENST00000264828 TEX45Q8NA69 505 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 SFXN3Q9BWM7 321 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 FGF11Q92914 225 aa15.25■□□□□ 0.03
COL5A3-201ENST00000264828 GSN-AS1Q9NRJ2 163 aa15.24■□□□□ 0.03
COL5A3-201ENST00000264828 MEF2CQ06413 473 aaPredicted RBP15.24■□□□□ 0.03
COL5A3-201ENST00000264828 TBR1Q16650 682 aa15.24■□□□□ 0.03
COL5A3-201ENST00000264828 FAM201AQ5SY85 155 aa15.24■□□□□ 0.03
COL5A3-201ENST00000264828 CLDND2Q8NHS1 167 aa15.24■□□□□ 0.03
COL5A3-201ENST00000264828 SCGB3A1Q96QR1 104 aa15.24■□□□□ 0.03
COL5A3-201ENST00000264828 KIAA0100Q14667 2235 aaKnown RBP15.24■□□□□ 0.03
COL5A3-201ENST00000264828 PEX7O00628 323 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 PCOLCEQ15113 449 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 NUDT11Q96G61 164 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 PQLC2LA1A4F0 135 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 RAMP1O60894 148 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 DNM1P46Q6ZS02 220 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 TRGV3P03979 118 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 CD69Q07108 199 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 A0A1W2PQM1 296 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 C17orf98A8MV24 154 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 IFNL4K9M1U5 179 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 VENTXO95231 258 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 APOMO95445 188 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 TMEM95Q3KNT9 176 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 LINC01560Q8TB33 94 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 FBXL15Q9H469 300 aa15.23■□□□□ 0.03
COL5A3-201ENST00000264828 IFI27L2Q9H2X8 130 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 LOC285556D6RIA3 1793 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 SRP19P09132 144 aaKnown RBP15.22■□□□□ 0.03
COL5A3-201ENST00000264828 SMIM10L1P0DMW3 83 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 SAPCD1Q5SSQ6 148 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 SMIM10Q96HG1 83 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 TNFRSF18Q9Y5U5 241 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 SIPA1L1O43166 1804 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 NBEAP1P0C6P0 100 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 ASIPP42127 132 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 MIR17HGQ75NE6 70 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 GATAD1Q8WUU5 269 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 TIAF1O95411 115 aa15.22■□□□□ 0.03
COL5A3-201ENST00000264828 CA1P00915 261 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms