RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 DGAT2L7PQ6IED9 249 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 BMPERQ8N8U9 685 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 HIST1H2BAQ96A08 127 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 CDX1P47902 265 aaPredicted RBP11.78□□□□□ -0.52
CDH3-201ENST00000264012 MEF2CQ06413 473 aaPredicted RBP11.78□□□□□ -0.52
CDH3-201ENST00000264012 GATAD1Q8WUU5 269 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 SPSB4Q96A44 273 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 RCC1LQ96I51 464 aaKnown RBP11.78□□□□□ -0.52
CDH3-201ENST00000264012 C16orf92Q96LL3 132 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 GSX1Q9H4S2 264 aaPredicted RBP11.78□□□□□ -0.52
CDH3-201ENST00000264012 TRAV14DV4A0A0A6YYC5 116 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 CRYBB3P26998 211 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 LY6EQ16553 131 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 OR4A47Q6IF82 309 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 WDR82Q6UXN9 313 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 DPM3Q9P2X0 92 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 HSPB7Q9UBY9 170 aa11.78□□□□□ -0.52
CDH3-201ENST00000264012 A0A0A6YYD4 124 aa11.77□□□□□ -0.52
CDH3-201ENST00000264012 MGPP08493 103 aa11.77□□□□□ -0.52
CDH3-201ENST00000264012 MAP1LC3CQ9BXW4 147 aa11.77□□□□□ -0.52
CDH3-201ENST00000264012 A0A1W2PS18 150 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 MRPL37Q9BZE1 423 aaKnown RBP11.77□□□□□ -0.53
CDH3-201ENST00000264012 RAXQ9Y2V3 346 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 TRAV24A0A0B4J272 114 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 TMEM189A5PLL7 270 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 CBY3A6NI87 242 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 MT-ND6P03923 174 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 TFPI2P48307 235 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 GTF3AQ92664 365 aaKnown RBP11.77□□□□□ -0.53
CDH3-201ENST00000264012 LINC00312Q9Y6C7 94 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 TMEM56-RWDD3S4R434 201 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 Q1RN00 199 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 ZNF343Q6P1L6 599 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 PARLQ9H300 379 aa11.77□□□□□ -0.53
CDH3-201ENST00000264012 IGHV3OR16-10A0A075B7F0 116 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 H3BTX0 84 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 GCGP01275 180 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 FOXF2Q12947 444 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 NEU4Q8WWR8 484 aaPredicted RBP11.76□□□□□ -0.53
CDH3-201ENST00000264012 NPCDR1Q9BY65 106 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 IGKV1-12A0A0C4DH73 117 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 MOSP00540 346 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 IGKV1D-12P01611 117 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 CCL19Q99731 98 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 FBXL15Q9H469 300 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 IGHV1-18A0A0C4DH31 117 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 TMEM97Q5BJF2 176 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 SPACA3Q8IXA5 215 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 RRHO14718 337 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 RPL7P18124 248 aaKnown RBP11.76□□□□□ -0.53
CDH3-201ENST00000264012 GCHFRP30047 84 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 WDR25Q64LD2 544 aaPredicted RBP11.76□□□□□ -0.53
CDH3-201ENST00000264012 MRPL32Q9BYC8 188 aaKnown RBP11.76□□□□□ -0.53
CDH3-201ENST00000264012 PKDREJQ9NTG1 2253 aa11.76□□□□□ -0.53
CDH3-201ENST00000264012 SNCGO76070 127 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 COTL1Q14019 142 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 LY6G6FQ5SQ64 297 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 ZNF385CQ66K41 422 aaPredicted RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 Q6ZN92 141 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 RNASE6Q93091 150 aaKnown RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 SSBP3Q9BWW4 388 aaPredicted RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 MYO7BQ6PIF6 2116 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 RPLP1P05386 114 aaKnown RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 ACAA1P09110 424 aaPredicted RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 ZNF497Q6ZNH5 498 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 OR10J6PQ8NGY7 276 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 TTC28Q96AY4 2481 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 MRPL20Q9BYC9 149 aaKnown RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 IGHV3-35A0A0C4DH35 117 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 ZNF25P17030 456 aaPredicted RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 AGAP20933 346 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 ZNF738Q8NE65 137 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 IFI27L2Q9H2X8 130 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 ATRXP46100 2492 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 DIDO1Q9BTC0 2240 aaKnown RBP11.75□□□□□ -0.53
CDH3-201ENST00000264012 MGAMO43451 1857 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 CCL3L1P16619 93 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 TM4SF20Q53R12 229 aa11.75□□□□□ -0.53
CDH3-201ENST00000264012 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.74□□□□□ -0.53
CDH3-201ENST00000264012 CGB1A6NKQ9 187 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 TMEM250H0YL14 139 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 TFF1P04155 84 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 PET117Q6UWS5 81 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 GTF2H5Q6ZYL4 71 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 GGACTQ9BVM4 153 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 TGIF2-C20orf24A0A0A6YYL0 155 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
CDH3-201ENST00000264012 EGR1P18146 543 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 DDTP30046 118 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 LCN2P80188 198 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 ZNF506Q5JVG8 444 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 SGK494Q96LW2 274 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 RNF126Q9BV68 326 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 HSPB8Q9UJY1 196 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 IL4P05112 153 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 TMEM177Q53S58 311 aa11.74□□□□□ -0.53
CDH3-201ENST00000264012 SLC25A33Q9BSK2 321 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms