RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RAP2BP61225 183 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 POLR2GP62487 172 aaKnown RBP eCLIP7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 GNB1P62873 340 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 Q6YL49 198 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 Q8N9W7 124 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 TEX45Q8NA69 505 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 OR11H4Q8NGC9 324 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 TMEM167AQ8TBQ9 72 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 SPIN2AQ99865 258 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 RNF5Q99942 180 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 SPIN2BQ9BPZ2 258 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 SLC25A33Q9BSK2 321 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 HINT2Q9BX68 163 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 OR5AC2Q9NZP5 309 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 TCF19Q9Y242 345 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 RCL1Q9Y2P8 373 aaKnown RBP7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 OR51B2Q9Y5P1 312 aa7.75□□□□□ -1.17
SNRNP40-201ENST00000263694 FN1P02751 2386 aaKnown RBP7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 NSD1Q96L73 2696 aaPredicted RBP7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 MAST4O15021 2626 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 TEP1Q99973 2627 aaKnown RBP7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 TEX50A0A1B0GTY4 177 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 A0A1B0GW64 132 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 C15orf61A6NNL5 157 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 K7EPK0 472 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 CHST1O43916 411 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 NDUFA3O95167 84 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 MPC2O95563 127 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 IFNA17P01571 189 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 APELAP0DMC3 54 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 IAPPP10997 89 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 SLC25A6P12236 298 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 HNF1AP20823 631 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 PSMB6P28072 239 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 RPL8P62917 257 aaKnown RBP7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 SSBP2P81877 361 aaPredicted RBP7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 CYCSP99999 105 aaKnown RBP7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 ID3Q02535 119 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 TNXAQ16473 311 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 PRSS8Q16651 343 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 C5orf64Q2M2E5 130 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 PPP1R27Q86WC6 154 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 TCTE3Q8IZS6 198 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 FAM71E2Q8N5Q1 922 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 RBM14Q96PK6 669 aaKnown RBP7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 AIFM2Q9BRQ8 373 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 RNF126Q9BV68 326 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 RBKSQ9H477 322 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 TMEM14BQ9NUH8 114 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 KIAA1456Q9P272 454 aa7.74□□□□□ -1.17
SNRNP40-201ENST00000263694 PIGBOS1A0A0B4J2F0 54 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 CGB1A6NKQ9 187 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 LINC01548A6NM66 108 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 WRBO00258 174 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 SSSCA1O60232 199 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 TMEM50AO95807 157 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 CA2P00918 260 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 AMY1AP04745 511 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 NKX2-5P52952 324 aaPredicted RBP7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 TNFRSF9Q07011 255 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 OR10W1Q8NGF6 305 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 GRPEL2Q8TAA5 225 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 VSTM2AQ8TAG5 236 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 HSPB9Q9BQS6 159 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 TMEM160Q9NX00 188 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 COA4Q9NYJ1 87 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 MBD2Q9UBB5 411 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 HSPB7Q9UBY9 170 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 PRNDQ9UKY0 176 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 FOXA2Q9Y261 457 aaPredicted RBP7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 POMT1Q9Y6A1 747 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 CUBNO60494 3623 aa7.73□□□□□ -1.17
SNRNP40-201ENST00000263694 CEBPZOSA8MTT3 80 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 SPDEFO95238 335 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 SRD5A1P18405 259 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 HSPE1P61604 102 aaKnown RBP7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 AANATQ16613 207 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 TUSC1Q2TAM9 212 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 Q6ZS46 218 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 MMD2Q8IY49 270 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 TEX29Q8N6K0 151 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 C5orf56Q8N8D9 126 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 OR4A5Q8NH83 315 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 TAF15Q92804 592 aaKnown RBP eCLIP7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 RASL11BQ9BPW5 248 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 FAM103A1Q9BTL3 118 aaKnown RBP7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 PRDM13Q9H4Q3 707 aa7.72□□□□□ -1.17
SNRNP40-201ENST00000263694 FXYD6-FXYD2A0A087WZ82 144 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 H3BP45 60 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 SYNGR2O43760 224 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 DEDDO75618 318 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 CNIH1O95406 144 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 PAX9P55771 341 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 BLCAPP62952 87 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 CX3CL1P78423 397 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 NDPQ00604 133 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 AARDQ4LEZ3 155 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 C9orf152Q5JTZ5 239 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 C19orf35Q6ZS72 473 aa7.71□□□□□ -1.17
SNRNP40-201ENST00000263694 ZNF429Q86V71 674 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms