RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 SAA2-SAA4A0A096LPE2 208 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 WNT2P09544 360 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 SAA2P0DJI9 122 aaPredicted RBP11.17□□□□□ -0.62
VMP1-201ENST00000262291 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 SLC25A6P12236 298 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 PAX5Q02548 391 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 ST6GALNAC3Q8NDV1 305 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 HSD17B10Q99714 261 aaKnown RBP11.17□□□□□ -0.62
VMP1-201ENST00000262291 PPIAL4AQ9Y536 164 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 PKD1L2Q7Z442 2459 aa11.17□□□□□ -0.62
VMP1-201ENST00000262291 CHRNB4P30926 498 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 CD81P60033 236 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 ZNF266Q14584 549 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 CR1LQ2VPA4 569 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 TEX36Q5VZQ5 186 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 OR4C12Q96R67 309 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 ATP5SQ99766 215 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 RBFOX3A6NFN3 312 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 NKX6-3A6NJ46 265 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 DLEU1O43261 78 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 P0C879 139 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 RPL31P62899 125 aaKnown RBP11.16□□□□□ -0.62
VMP1-201ENST00000262291 DNLZQ5SXM8 178 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 BEND2Q8NDZ0 799 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 CTSZQ9UBR2 303 aa11.16□□□□□ -0.62
VMP1-201ENST00000262291 SPTAN1Q13813 2472 aaKnown RBP11.16□□□□□ -0.62
VMP1-201ENST00000262291 TRAV38-1A0A0B4J264 116 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 CEBPZOSA8MTT3 80 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 MYOD1P15172 320 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 RPL29P47914 159 aaKnown RBP11.15□□□□□ -0.62
VMP1-201ENST00000262291 TEX38Q6PEX7 206 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.15□□□□□ -0.62
VMP1-201ENST00000262291 IDI2-AS1Q9NZ38 188 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 WSB1Q9Y6I7 421 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 VSTM5A8MXK1 200 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 M0R143 59 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 MMP9P14780 707 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 RAB4AP20338 218 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 REG1BP48304 166 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 MRPS11P82912 194 aaKnown RBP11.15□□□□□ -0.62
VMP1-201ENST00000262291 MSMO1Q15800 293 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 VSIRQ9H7M9 311 aa11.15□□□□□ -0.62
VMP1-201ENST00000262291 UBE2L5PA0A1B0GUS4 154 aa11.15□□□□□ -0.63
VMP1-201ENST00000262291 APOBEC3AP31941 199 aaPredicted RBP11.15□□□□□ -0.63
VMP1-201ENST00000262291 BAXQ07812 192 aa11.15□□□□□ -0.63
VMP1-201ENST00000262291 S1PR3Q99500 378 aa11.15□□□□□ -0.63
VMP1-201ENST00000262291 NIPSNAP3BQ9BS92 247 aa11.15□□□□□ -0.63
VMP1-201ENST00000262291 DVL1O14640 695 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 COL8A2P25067 703 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 CLEC12BQ2HXU8 276 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 TMEM200BQ69YZ2 307 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 ZNF525Q8N782 197 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 HSPB7Q9UBY9 170 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 TET2Q6N021 2002 aaPredicted RBP11.14□□□□□ -0.63
VMP1-201ENST00000262291 OPN1MWP04001 364 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 SRP19P09132 144 aaKnown RBP11.14□□□□□ -0.63
VMP1-201ENST00000262291 OPN1MW2P0DN77 364 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 OPN1MW3P0DN78 364 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 BATFQ16520 125 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 C1orf87Q8N0U7 546 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 MUC15Q8N387 334 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 DIRC2Q96SL1 478 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 PITPNC1Q9UKF7 332 aa11.14□□□□□ -0.63
VMP1-201ENST00000262291 IGHV1-69-2A0A0G2JMI3 117 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 RAB29O14966 203 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 IFNA5P01569 189 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 UQCRFS1P47985 274 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 ELLP55199 621 aaPredicted RBP11.13□□□□□ -0.63
VMP1-201ENST00000262291 WDR25Q64LD2 544 aaPredicted RBP11.13□□□□□ -0.63
VMP1-201ENST00000262291 TMEM183AQ8IXX5 376 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 ASH1LQ9NR48 2969 aaKnown RBP11.13□□□□□ -0.63
VMP1-201ENST00000262291 MALRD1Q5VYJ5 2156 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 TNCP24821 2201 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 hADV38S2A0JD32 116 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 SLC38A11Q08AI6 406 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 OR4X1Q8NH49 305 aa11.13□□□□□ -0.63
VMP1-201ENST00000262291 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 DFFBO76075 338 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 DIAPH2-AS1Q14236 149 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 NECAP1Q8NC96 275 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 ZNF439Q8NDP4 499 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 OR13D1Q8NGV5 346 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 SCGB1C1Q8TD33 95 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 MS4A5Q9H3V2 200 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 A0A087WWC5 75 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 NDUFB3O43676 98 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 ARSJQ5FYB0 599 aaPredicted RBP11.12□□□□□ -0.63
VMP1-201ENST00000262291 ZNF705AQ6ZN79 300 aaPredicted RBP11.12□□□□□ -0.63
VMP1-201ENST00000262291 HINT2Q9BX68 163 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 ACTR3CQ9C0K3 210 aaPredicted RBP11.12□□□□□ -0.63
VMP1-201ENST00000262291 TMEM140Q9NV12 185 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 RPUSD1Q9UJJ7 312 aaKnown RBP11.12□□□□□ -0.63
VMP1-201ENST00000262291 GAB2Q9UQC2 676 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 MED13LQ71F56 2210 aa11.12□□□□□ -0.63
VMP1-201ENST00000262291 XKRY2A2RUG3 117 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms