RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 A6NDN8 102 aa10.29□□□□□ -0.76
SPG11-201ENST00000261866 OR51G1Q8NGK1 321 aa10.29□□□□□ -0.76
SPG11-201ENST00000261866 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.29□□□□□ -0.76
SPG11-201ENST00000261866 K7ERU9 68 aa10.29□□□□□ -0.76
SPG11-201ENST00000261866 ZNF883P0CG24 379 aa10.29□□□□□ -0.76
SPG11-201ENST00000261866 IFNL4K9M1U5 179 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 RNASE4P34096 147 aaKnown RBP10.28□□□□□ -0.76
SPG11-201ENST00000261866 GATA2P23769 480 aaPredicted RBP10.28□□□□□ -0.76
SPG11-201ENST00000261866 PTGDSP41222 190 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 ZFP30Q9Y2G7 519 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 SCN5AQ14524 2016 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 FHITP49789 147 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 LINC01590Q5TEZ4 76 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 TEX29Q8N6K0 151 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 STPG3Q8N7X2 389 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 LHFPL5Q8TAF8 219 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 CABIN1Q9Y6J0 2220 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 M0R381 172 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 TDGF1P13385 188 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 SPATA45Q537H7 98 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 RIPPLY2Q5TAB7 128 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 TAF15Q92804 592 aaKnown RBP eCLIP10.28□□□□□ -0.76
SPG11-201ENST00000261866 SFRP2Q96HF1 295 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 GPR132Q9UNW8 380 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 C12orf77C9JDV5 145 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 VDAC2P45880 294 aaPredicted RBP10.28□□□□□ -0.76
SPG11-201ENST00000261866 VAX1Q5SQQ9 334 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 GFI1BQ5VTD9 330 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 DUX3Q96PT4 197 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 A0A087WV48 116 aa10.28□□□□□ -0.76
SPG11-201ENST00000261866 IGHMP01871 453 aa10.27□□□□□ -0.76
SPG11-201ENST00000261866 Q71RC1 249 aaPredicted RBP10.27□□□□□ -0.76
SPG11-201ENST00000261866 OR1P1Q8NH06 330 aa10.27□□□□□ -0.76
SPG11-201ENST00000261866 EFEMP2O95967 443 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 BCL2P10415 239 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 MUC1P15941 1255 aaPredicted RBP10.27□□□□□ -0.77
SPG11-201ENST00000261866 OR4X2Q8NGF9 303 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 HSPB9Q9BQS6 159 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 PSME4Q14997 1843 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 TRBV5-7A0A0A0MS05 114 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 C17orf98A8MV24 154 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 TMEM170BQ5T4T1 132 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 IMMP1LQ96LU5 166 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 RALGAPA1Q6GYQ0 2036 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 WDR90Q96KV7 1748 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 TRAV40A0A0B4J280 105 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 PSG9Q00887 426 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 PNRC1Q12796 327 aaPredicted RBP10.27□□□□□ -0.77
SPG11-201ENST00000261866 WNK3Q9BYP7 1800 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 PTPRFP10586 1907 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 M0R143 59 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 CD99P14209 185 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 HOXB1P14653 301 aaPredicted RBP10.27□□□□□ -0.77
SPG11-201ENST00000261866 ICAM4Q14773 271 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 MRPL14Q6P1L8 145 aaKnown RBP10.27□□□□□ -0.77
SPG11-201ENST00000261866 BEND2Q8NDZ0 799 aa10.27□□□□□ -0.77
SPG11-201ENST00000261866 ZNF415Q09FC8 603 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 C10orf128Q5T292 105 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 FAM159AQ6UWV7 190 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 MAPK1IP1LQ8NDC0 245 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 A0A0U1RRA0 63 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 RNASEH2CQ8TDP1 164 aaKnown RBP10.26□□□□□ -0.77
SPG11-201ENST00000261866 RNASE6Q93091 150 aaKnown RBP10.26□□□□□ -0.77
SPG11-201ENST00000261866 FOXD3Q9UJU5 478 aaPredicted RBP10.26□□□□□ -0.77
SPG11-201ENST00000261866 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.26□□□□□ -0.77
SPG11-201ENST00000261866 RBFOX2O43251 390 aaKnown RBP eCLIP10.26□□□□□ -0.77
SPG11-201ENST00000261866 CFHR1Q03591 330 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 TMEM219Q86XT9 240 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 NEU4Q8WWR8 484 aaPredicted RBP10.26□□□□□ -0.77
SPG11-201ENST00000261866 ARPC1AQ92747 370 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 DPM3Q9P2X0 92 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 C17orf100A8MU93 164 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 HOXA6P31267 233 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 LINC01587Q99440 93 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 IFITM3Q01628 133 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 BIVMQ86UB2 503 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 GTF3AQ92664 365 aaKnown RBP10.26□□□□□ -0.77
SPG11-201ENST00000261866 TMEM45BQ96B21 275 aa10.26□□□□□ -0.77
SPG11-201ENST00000261866 MALP21145 153 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 TTC32Q5I0X7 151 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 LEMD1Q68G75 181 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 DNM1P46Q6ZS02 220 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 NABP2Q9BQ15 211 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 TRAF4Q9BUZ4 470 aaPredicted RBP10.25□□□□□ -0.77
SPG11-201ENST00000261866 COL4A6Q14031 1691 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 TP53BP1Q12888 1972 aaPredicted RBP10.25□□□□□ -0.77
SPG11-201ENST00000261866 DNAL4O96015 105 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 COX6CP09669 75 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 COX5BP10606 129 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 TFF3Q07654 80 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 C1QTNF12Q5T7M4 302 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 PLP1P60201 277 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 NPC2P61916 151 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 UNQ6494/PRO21346Q6UXR6 183 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 SCN10AQ9Y5Y9 1956 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 MSGN1A6NI15 193 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 KLRD1Q13241 179 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 TGIF2-C20orf24A0A0A6YYL0 155 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 CEACAM4O75871 244 aa10.25□□□□□ -0.77
SPG11-201ENST00000261866 THBDP07204 575 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms