RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 LHBP01229 141 aa21.01■□□□□ 0.95
RAB40C-201ENST00000248139 AMBPP02760 352 aa21.01■□□□□ 0.95
RAB40C-201ENST00000248139 HIST1H1BP16401 226 aaKnown RBP21.01■□□□□ 0.95
RAB40C-201ENST00000248139 MZT1Q08AG7 82 aa21.01■□□□□ 0.95
RAB40C-201ENST00000248139 ZADH2Q8N4Q0 377 aa21.01■□□□□ 0.95
RAB40C-201ENST00000248139 PAX5Q02548 391 aa21.01■□□□□ 0.95
RAB40C-201ENST00000248139 GCM1Q9NP62 436 aa21.01■□□□□ 0.95
RAB40C-201ENST00000248139 CGB3P0DN86 165 aa21■□□□□ 0.95
RAB40C-201ENST00000248139 CGB7P0DN87 165 aa21■□□□□ 0.95
RAB40C-201ENST00000248139 TCF23Q7RTU1 214 aa21■□□□□ 0.95
RAB40C-201ENST00000248139 TMEM183AQ8IXX5 376 aa21■□□□□ 0.95
RAB40C-201ENST00000248139 OR1P1Q8NH06 330 aa21■□□□□ 0.95
RAB40C-201ENST00000248139 RAI1Q7Z5J4 1906 aaPredicted RBP21■□□□□ 0.95
RAB40C-201ENST00000248139 ACACAQ13085 2346 aa21■□□□□ 0.95
RAB40C-201ENST00000248139 A0A1B0GUS0 222 aa21■□□□□ 0.95
RAB40C-201ENST00000248139 CR1LQ2VPA4 569 aa21■□□□□ 0.95
RAB40C-201ENST00000248139 AARDQ4LEZ3 155 aa21■□□□□ 0.95
RAB40C-201ENST00000248139 ZNF729A6NN14 1252 aaPredicted RBP20.99■□□□□ 0.95
RAB40C-201ENST00000248139 TGOLN2O43493 480 aa20.99■□□□□ 0.95
RAB40C-201ENST00000248139 ACTL6BO94805 426 aa20.99■□□□□ 0.95
RAB40C-201ENST00000248139 GLRXP35754 106 aa20.99■□□□□ 0.95
RAB40C-201ENST00000248139 OPRK1P41145 380 aa20.99■□□□□ 0.95
RAB40C-201ENST00000248139 THBS3P49746 956 aa20.99■□□□□ 0.95
RAB40C-201ENST00000248139 YTHDF2Q9Y5A9 579 aaKnown RBP20.99■□□□□ 0.95
RAB40C-201ENST00000248139 CA2P00918 260 aa20.99■□□□□ 0.95
RAB40C-201ENST00000248139 MRPS11P82912 194 aaKnown RBP20.99■□□□□ 0.95
RAB40C-201ENST00000248139 TIMM23BQ5SRD1 257 aa20.99■□□□□ 0.95
RAB40C-201ENST00000248139 IGKV1-16P04430 117 aa20.98■□□□□ 0.95
RAB40C-201ENST00000248139 IL6RP08887 468 aaPredicted RBP20.98■□□□□ 0.95
RAB40C-201ENST00000248139 NUBP1P53384 320 aa20.98■□□□□ 0.95
RAB40C-201ENST00000248139 OR4S2Q8NH73 311 aa20.98■□□□□ 0.95
RAB40C-201ENST00000248139 ANAPC16Q96DE5 110 aa20.98■□□□□ 0.95
RAB40C-201ENST00000248139 KBTBD11-OT1A0A1B0GTJ5 212 aa20.98■□□□□ 0.95
RAB40C-201ENST00000248139 C15orf61A6NNL5 157 aa20.98■□□□□ 0.95
RAB40C-201ENST00000248139 IL3RAP26951 378 aa20.98■□□□□ 0.95
RAB40C-201ENST00000248139 CFHR2P36980 270 aa20.98■□□□□ 0.95
RAB40C-201ENST00000248139 RPP30P78346 268 aaKnown RBP20.98■□□□□ 0.95
RAB40C-201ENST00000248139 RND1Q92730 232 aa20.98■□□□□ 0.95
RAB40C-201ENST00000248139 NDUFS6O75380 124 aaKnown RBP20.97■□□□□ 0.95
RAB40C-201ENST00000248139 IGFBP2P18065 325 aa20.97■□□□□ 0.95
RAB40C-201ENST00000248139 TNFAIP6P98066 277 aaPredicted RBP20.97■□□□□ 0.95
RAB40C-201ENST00000248139 ZGRF1Q86YA3 2104 aa20.97■□□□□ 0.95
RAB40C-201ENST00000248139 RELNP78509 3460 aa20.97■□□□□ 0.95
RAB40C-201ENST00000248139 GATA2P23769 480 aaPredicted RBP20.97■□□□□ 0.95
RAB40C-201ENST00000248139 MLANAQ16655 118 aa20.97■□□□□ 0.95
RAB40C-201ENST00000248139 STPG3Q8N7X2 389 aa20.97■□□□□ 0.95
RAB40C-201ENST00000248139 ZNF320A2RRD8 509 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 IGHV1-46P01743 117 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 STAG3L2P0CL84 134 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 STAG3L3P0CL85 134 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 NPY1RP25929 384 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 CCL8P80075 99 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 SLC24A4Q8NFF2 622 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 OR52E5Q8NH55 327 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 NPVFQ9HCQ7 196 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 IDI2-AS1Q9NZ38 188 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 SRRM4A7MD48 611 aaKnown RBP20.96■□□□□ 0.95
RAB40C-201ENST00000248139 PDE6DO43924 150 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 GGCTO75223 188 aaKnown RBP20.96■□□□□ 0.95
RAB40C-201ENST00000248139 ZCCHC14Q8WYQ9 949 aaKnown RBP20.96■□□□□ 0.95
RAB40C-201ENST00000248139 TANC2Q9HCD6 1990 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 DYSFO75923 2080 aa20.96■□□□□ 0.95
RAB40C-201ENST00000248139 EFNB3Q15768 340 aa20.95■□□□□ 0.94
RAB40C-201ENST00000248139 KCNIP2Q9NS61 270 aa20.95■□□□□ 0.94
RAB40C-201ENST00000248139 RNF7Q9UBF6 113 aa20.95■□□□□ 0.94
RAB40C-201ENST00000248139 TACC2O95359 2948 aa20.95■□□□□ 0.94
RAB40C-201ENST00000248139 TRGV10A0A0A0MS01 117 aa20.95■□□□□ 0.94
RAB40C-201ENST00000248139 VENTXO95231 258 aa20.95■□□□□ 0.94
RAB40C-201ENST00000248139 RAB1CQ92928 201 aa20.95■□□□□ 0.94
RAB40C-201ENST00000248139 LSM4Q9Y4Z0 139 aaKnown RBP20.95■□□□□ 0.94
RAB40C-201ENST00000248139 ACTL10Q5JWF8 245 aa20.94■□□□□ 0.94
RAB40C-201ENST00000248139 GAFA1Q96PS6 74 aa20.94■□□□□ 0.94
RAB40C-201ENST00000248139 FAM90A9PA6NNJ1 464 aa20.94■□□□□ 0.94
RAB40C-201ENST00000248139 GPX4P36969 197 aaPredicted RBP20.94■□□□□ 0.94
RAB40C-201ENST00000248139 HSPE1P61604 102 aaKnown RBP20.94■□□□□ 0.94
RAB40C-201ENST00000248139 SGMS2Q8NHU3 365 aa20.94■□□□□ 0.94
RAB40C-201ENST00000248139 OCC1Q8TAD7 63 aa20.94■□□□□ 0.94
RAB40C-201ENST00000248139 MPDU1O75352 247 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 OR4P4Q8NGL7 312 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 OR51B2Q9Y5P1 312 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 IGLV3-9A0A075B6K5 115 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 GZMBP10144 247 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 TEPPQ6URK8 271 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 FAM169BQ8N8A8 192 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 LRFN3Q9BTN0 628 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 TMEM14BQ9NUH8 114 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 POLEQ07864 2286 aa20.93■□□□□ 0.94
RAB40C-201ENST00000248139 CXorf1O96002 111 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 DEFA6Q01524 100 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 STUMQ69YW2 141 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 FAM216AQ8WUB2 273 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 TMPRSS2O15393 492 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 NDUFB7P17568 137 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 RAB7AP51149 207 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 TMPRSS3P57727 454 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 MIR17HGQ75NE6 70 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 SFRP2Q96HF1 295 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 ENY2Q9NPA8 101 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 SH3BGRL2Q9UJC5 107 aa20.92■□□□□ 0.94
RAB40C-201ENST00000248139 F6UZH7 168 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms