RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 CHRDL1Q9BU40 450 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 PXMP4Q9Y6I8 212 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 PTPN13Q12923 2485 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 FCER1GP30273 86 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 TRIP6Q15654 476 aaKnown RBP9.74□□□□□ -0.85
SOX9-201ENST00000245479 MIC13Q5XKP0 118 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 OR2T6Q8NHC8 308 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 NEURL1O76050 574 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 IGHV3-48P01763 117 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 RPL31P62899 125 aaKnown RBP9.74□□□□□ -0.85
SOX9-201ENST00000245479 NHLH1Q02575 133 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 PQLC2Q6ZP29 291 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 OR1L1Q8NH94 360 aa9.74□□□□□ -0.85
SOX9-201ENST00000245479 MUC22E2RYF6 1773 aaPredicted RBP9.73□□□□□ -0.85
SOX9-201ENST00000245479 HLA-DQA1P01909 254 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 UQCRFS1P47985 274 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 TFF3Q07654 80 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 RPP25LQ8N5L8 163 aaKnown RBP9.73□□□□□ -0.85
SOX9-201ENST00000245479 BCL2L2Q92843 193 aaPredicted RBP9.73□□□□□ -0.85
SOX9-201ENST00000245479 FER1L6-AS2Q96M78 137 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 CHRNA10Q9GZZ6 450 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 CENPEQ02224 2701 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 ZFYVE26Q68DK2 2539 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 NUDT3O95989 172 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 IGHEP01854 428 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 ACTL10Q5JWF8 245 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 C12orf54Q6X4T0 127 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 TMEM54Q969K7 222 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 hCG_38984A0A1B0GV85 526 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 S1PR2O95136 353 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 RNFT1Q5M7Z0 435 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 VWA1Q6PCB0 445 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 S100A7AQ86SG5 101 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 NIT1Q86X76 327 aa9.73□□□□□ -0.85
SOX9-201ENST00000245479 SP1P08047 785 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 SSTR5P35346 364 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 TCTAP57738 103 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 DOLPP1Q86YN1 238 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 FDCSPQ8NFU4 85 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 LSM10Q969L4 123 aaKnown RBP9.72□□□□□ -0.85
SOX9-201ENST00000245479 TXNDC17Q9BRA2 123 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 TMEM167BQ9NRX6 74 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 TNRC18O15417 2968 aaPredicted RBP9.72□□□□□ -0.85
SOX9-201ENST00000245479 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 OR5AL1P0C617 328 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 IBA57Q5T440 356 aaKnown RBP9.72□□□□□ -0.85
SOX9-201ENST00000245479 SLC25A34Q6PIV7 304 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 C19orf35Q6ZS72 473 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 FA2HQ7L5A8 372 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 SSX8Q7RTT4 187 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 BPIFA4PQ86YQ2 179 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 NPCDR1Q9BY65 106 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 PLSCR2Q9NRY7 297 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 IL36BQ9NZH7 164 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 PTPRQQ9UMZ3 2332 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 TLN2Q9Y4G6 2542 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 TACC2O95359 2948 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 ARR3P36575 388 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 UBE2L3P68036 154 aaKnown RBP9.72□□□□□ -0.85
SOX9-201ENST00000245479 OR5A2Q8NGI9 324 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 IL19Q9UHD0 177 aa9.72□□□□□ -0.85
SOX9-201ENST00000245479 ANKHD1Q8IWZ3 2542 aaKnown RBP9.72□□□□□ -0.85
SOX9-201ENST00000245479 MALRD1Q5VYJ5 2156 aa9.71□□□□□ -0.85
SOX9-201ENST00000245479 OR5B21A6NL26 309 aa9.71□□□□□ -0.85
SOX9-201ENST00000245479 M0R296 226 aa9.71□□□□□ -0.85
SOX9-201ENST00000245479 GZMHP20718 246 aa9.71□□□□□ -0.85
SOX9-201ENST00000245479 CCL1P22362 96 aa9.71□□□□□ -0.85
SOX9-201ENST00000245479 C10orf128Q5T292 105 aa9.71□□□□□ -0.85
SOX9-201ENST00000245479 SSUH2Q9Y2M2 353 aa9.71□□□□□ -0.85
SOX9-201ENST00000245479 ZNF835Q9Y2P0 537 aa9.71□□□□□ -0.85
SOX9-201ENST00000245479 KLF13Q9Y2Y9 288 aaPredicted RBP9.71□□□□□ -0.85
SOX9-201ENST00000245479 IFNL4K9M1U5 179 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 COX7A2P2O60397 106 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 ZFP36L1Q07352 338 aaKnown RBP9.71□□□□□ -0.86
SOX9-201ENST00000245479 MAP1LC3CQ9BXW4 147 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 SAP30LQ9HAJ7 183 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 MYO18BQ8IUG5 2567 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 TMEM210A6NLX4 147 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A26D6RGX4 464 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 OR2H2O95918 312 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 CRYBB3P26998 211 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 MAS1LP35410 378 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 PRR31Q5SQ13 230 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 OR8B2Q96RD0 313 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 SF3B5Q9BWJ5 86 aaKnown RBP9.71□□□□□ -0.86
SOX9-201ENST00000245479 DLL3Q9NYJ7 618 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 TIMM9Q9Y5J7 89 aa9.71□□□□□ -0.86
SOX9-201ENST00000245479 SERTM2A0A1B0GWG4 89 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 TMEM50AO95807 157 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 TMEM11P17152 192 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 HTR1DP28221 377 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 ZNF137PP52743 207 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 SELENOVP59797 346 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 NHLRC2Q8NBF2 726 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 OR8B3Q8NGG8 313 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 PRSS3P2Q8NHM4 247 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 ZDHHC16Q969W1 377 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 ZNF703Q9H7S9 590 aaPredicted RBP9.7□□□□□ -0.86
SOX9-201ENST00000245479 RAB9BQ9NP90 201 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 KLK10O43240 276 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms