RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TIGITQ495A1 244 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 FAM90A2PQ658T7 463 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 HILPDAQ9Y5L2 63 aa9.31□□□□□ -0.92
COPA-201ENST00000241704 DOCK7Q96N67 2140 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 RAB29O14966 203 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 GLRXP35754 106 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 REG1BP48304 166 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 IGHV1-69-2A0A0G2JMI3 117 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 SPINK4O60575 86 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 IL6RP08887 468 aaPredicted RBP9.3□□□□□ -0.92
COPA-201ENST00000241704 FHL1Q13642 323 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 COA6Q5JTJ3 125 aaKnown RBP9.3□□□□□ -0.92
COPA-201ENST00000241704 TMEM256Q8N2U0 113 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 DPRXA6NFQ7 191 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 GAGE10A6NGK3 116 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 SERF1AO75920 110 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 ARF6P62330 175 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 ECSCRQ19T08 205 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 C12orf54Q6X4T0 127 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 OR5B3Q8NH48 314 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 RNASE8Q8TDE3 154 aaKnown RBP9.3□□□□□ -0.92
COPA-201ENST00000241704 RNASE6Q93091 150 aaKnown RBP9.3□□□□□ -0.92
COPA-201ENST00000241704 C18orf12Q96KH6 178 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 SPG11Q96JI7 2443 aa9.3□□□□□ -0.92
COPA-201ENST00000241704 hCG_38984A0A1B0GV85 526 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 M0R2Z0 102 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 OR2H2O95918 312 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 MPV17P39210 176 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 IL15RAQ13261 267 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 UNQ5815/PRO19632Q6UWF5 114 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 AAMDCQ9H7C9 122 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 MT-ND6P03923 174 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 RFNGQ9Y644 331 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 GNG7O60262 68 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 ZG16O60844 167 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 FOXH1O75593 365 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 PFN1P07737 140 aaKnown RBP9.29□□□□□ -0.92
COPA-201ENST00000241704 SNRNP40Q96DI7 357 aaKnown RBP9.29□□□□□ -0.92
COPA-201ENST00000241704 E9PLN8 166 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 H0Y8G0 127 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 CD40P25942 277 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 NHLH1Q02575 133 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 Q5PR19 223 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 RNASEKQ6P5S7 137 aaKnown RBP9.29□□□□□ -0.92
COPA-201ENST00000241704 KLHDC3Q9BQ90 382 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 VKORC1Q9BQB6 163 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 OR1A1Q9P1Q5 309 aa9.29□□□□□ -0.92
COPA-201ENST00000241704 TRAV30A0A087WSZ9 112 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 A0A0A6YYD4 124 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 A0A1B0GV72 72 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 S100A4P26447 101 aaKnown RBP9.28□□□□□ -0.92
COPA-201ENST00000241704 C19orf35Q6ZS72 473 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 SELENOHQ8IZQ5 122 aaKnown RBP9.28□□□□□ -0.92
COPA-201ENST00000241704 LRTM2Q8N967 370 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 C9orf106Q8NAJ2 232 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 DLL3Q9NYJ7 618 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 TBL2Q9Y4P3 447 aaKnown RBP9.28□□□□□ -0.92
COPA-201ENST00000241704 COX11Q9Y6N1 276 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 ZNF716A6NP11 495 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 CBLN1P23435 193 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 ADMP35318 185 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 PTGDSP41222 190 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 SPINK9Q5DT21 86 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 C1QTNF5Q9BXJ0 243 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 KIF26BQ2KJY2 2108 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 PLXNA2O75051 1894 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 SCTP09683 121 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 ZNF788Q6ZQV5 615 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 OR4F17Q8NGA8 305 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 PPIAL4CA0A0B4J2A2 164 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 NDUFB4O95168 129 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 CD55P08174 381 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 CECR9P0C854 216 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 PPIAL4GP0DN37 164 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 NPBWR2P48146 333 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
COPA-201ENST00000241704 OR4D5Q8NGN0 318 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 MBD3L1Q8WWY6 194 aa9.28□□□□□ -0.92
COPA-201ENST00000241704 PINLYPA6NC86 204 aa9.27□□□□□ -0.92
COPA-201ENST00000241704 HAX1O00165 279 aa9.27□□□□□ -0.92
COPA-201ENST00000241704 SLC35B1P78383 322 aa9.27□□□□□ -0.92
COPA-201ENST00000241704 BSPH1Q075Z2 132 aa9.27□□□□□ -0.92
COPA-201ENST00000241704 ATOH7Q8N100 152 aa9.27□□□□□ -0.92
COPA-201ENST00000241704 C1orf162Q8NEQ5 155 aaPredicted RBP9.27□□□□□ -0.92
COPA-201ENST00000241704 OR5P3Q8WZ94 311 aa9.27□□□□□ -0.92
COPA-201ENST00000241704 TAF15Q92804 592 aaKnown RBP eCLIP9.27□□□□□ -0.92
COPA-201ENST00000241704 WNT10AQ9GZT5 417 aa9.27□□□□□ -0.92
COPA-201ENST00000241704 IGKV3-7A0A075B6H7 116 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 RHOBP62745 196 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 C1QL2Q7Z5L3 287 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 DYNLRB2Q8TF09 96 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 SLC45A2Q9UMX9 530 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 LOC105371242A0A075B767 164 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 FAM106CPP0CH98 169 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 SFRP2Q96HF1 295 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 YPEL4Q96NS1 127 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 REPIN1Q9BWE0 567 aaKnown RBP9.27□□□□□ -0.93
COPA-201ENST00000241704 PSG2P11465 335 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 QRFPP83859 136 aa9.27□□□□□ -0.93
COPA-201ENST00000241704 TMEM191AQ9H0A3 160 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms