RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 RPL23P62829 140 aaKnown RBP11.82□□□□□ -0.52
TARDBP-201ENST00000240185 TMEM101Q96IK0 257 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 IDI2-AS1Q9NZ38 188 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 ADMP35318 185 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 FAM106AQ4KMX7 169 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 C1orf174Q8IYL3 243 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 TMEM249Q2WGJ8 235 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 CD160O95971 181 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 LEAP2Q969E1 77 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 KCNK17Q96T54 332 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 SHANK3Q9BYB0 1731 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 PKIBQ9C010 78 aa11.82□□□□□ -0.52
TARDBP-201ENST00000240185 AKAP11Q9UKA4 1901 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 CHD4Q14839 1912 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 A0A1B0GW15 77 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 HIGD1CA8MV81 97 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 CXCL10P02778 98 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 SAMD5Q5TGI4 173 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 SPRED2Q7Z698 418 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 ITLN1Q8WWA0 313 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 ZFC3H1O60293 1989 aaKnown RBP11.81□□□□□ -0.52
TARDBP-201ENST00000240185 RNF222A6NCQ9 220 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 TMEM14DPA8MWL7 114 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 SEC11AP67812 179 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 JPT1Q9UK76 154 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 IGKV3-20P01619 116 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 THY1P04216 161 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 COL9A1P20849 921 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 LEPP41159 167 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 NUTF2P61970 127 aaKnown RBP11.81□□□□□ -0.52
TARDBP-201ENST00000240185 ZNF721Q8TF20 911 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 HIST1H2BLQ99880 126 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 XIRP1Q702N8 1843 aaKnown RBP11.81□□□□□ -0.52
TARDBP-201ENST00000240185 ATP5IP56385 69 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-201ENST00000240185 PCSK4Q6UW60 755 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 TMEM92Q6UXU6 159 aa11.81□□□□□ -0.52
TARDBP-201ENST00000240185 ASIPP42127 132 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 Q6AWC8 147 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 SLC25A15Q9Y619 301 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 EVPLQ92817 2033 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 TFF3Q07654 80 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 DNM1P46Q6ZS02 220 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 IGHV3OR16-13A0A075B7E8 117 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 IGHV3-74A0A0B4J1X5 117 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 CCL4P13236 92 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 SVILO95425 2214 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 SLC25A47Q6Q0C1 308 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 LHFPL6Q9Y693 200 aa11.8□□□□□ -0.52
TARDBP-201ENST00000240185 DIRC2Q96SL1 478 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 RPP25Q9BUL9 199 aaKnown RBP11.79□□□□□ -0.52
TARDBP-201ENST00000240185 MAST2Q6P0Q8 1798 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 SEC16AO15027 2179 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 IGHV1OR15-9A0A0B4J2B8 117 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 CITED1Q99966 193 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 CEACAM1P13688 526 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 WFDC6Q9BQY6 131 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 GTSF1LQ9H1H1 148 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 FOXS1O43638 330 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 TPTE2P1Q5T6R2 138 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 LAIR2Q6ISS4 152 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 KIR3DL3Q8N743 410 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 JMJD8Q96S16 334 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 PLA2G2FQ9BZM2 168 aa11.79□□□□□ -0.52
TARDBP-201ENST00000240185 GHRHP01286 108 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 IGFBP2P18065 325 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 ASCL4Q6XD76 172 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 SAXO1Q8IYX7 474 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 FER1L6-AS1Q8NA97 138 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 G6PC2Q9NQR9 355 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 HSD52Q0P140 79 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 PMS2CLQ68D20 193 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 CIARTQ8N365 385 aaPredicted RBP11.78□□□□□ -0.52
TARDBP-201ENST00000240185 SCN7AQ01118 1682 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 ADRA2AP08913 450 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 SNRPD3P62318 126 aaKnown RBP11.78□□□□□ -0.52
TARDBP-201ENST00000240185 SRSF3P84103 164 aaKnown RBP11.78□□□□□ -0.52
TARDBP-201ENST00000240185 ATP5G2Q06055 141 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 FMC1Q96HJ9 113 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 RNASE7Q9H1E1 156 aaKnown RBP11.78□□□□□ -0.52
TARDBP-201ENST00000240185 C9orf172C9J069 976 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 DPM2O94777 84 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 PRTN3P24158 256 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 TEX45Q8NA69 505 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 COQ2Q96H96 371 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 NAA38Q9BRA0 125 aaKnown RBP11.78□□□□□ -0.52
TARDBP-201ENST00000240185 SCN3AQ9NY46 2000 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 TNFSF13O75888 250 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 C1QTNF9P0C862 333 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 SELENOKQ9Y6D0 94 aa11.78□□□□□ -0.52
TARDBP-201ENST00000240185 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.52
TARDBP-201ENST00000240185 HBDP02042 147 aa11.77□□□□□ -0.52
TARDBP-201ENST00000240185 NGFRP08138 427 aa11.77□□□□□ -0.52
TARDBP-201ENST00000240185 SAA1P0DJI8 122 aaPredicted RBP11.77□□□□□ -0.52
TARDBP-201ENST00000240185 PTGDSP41222 190 aa11.77□□□□□ -0.52
TARDBP-201ENST00000240185 OCIAD2Q56VL3 154 aa11.77□□□□□ -0.52
TARDBP-201ENST00000240185 DUX5Q96PT3 197 aa11.77□□□□□ -0.52
TARDBP-201ENST00000240185 TRAV8-1A0A0A6YYK1 113 aa11.77□□□□□ -0.53
TARDBP-201ENST00000240185 SLC25A20O43772 301 aa11.77□□□□□ -0.53
TARDBP-201ENST00000240185 IFI27L2Q9H2X8 130 aa11.77□□□□□ -0.53
TARDBP-201ENST00000240185 NPIPB11E5RHQ5 1161 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms