RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 GCSAMLQ5JQS6 135 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 CLEC2AQ6UVW9 174 aa11.33□□□□□ -0.6
NEK4-201ENST00000233027 TRBV20OR9-2A0A075B6H5 130 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 TRAV30A0A087WSZ9 112 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 IGHV3-49A0A0A0MS15 119 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 RRN3P1Q2M238 152 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 KCNS1Q96KK3 526 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 ZNF56Q15929 161 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 TMEM186Q96B77 213 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 TBX6O95947 436 aaPredicted RBP11.32□□□□□ -0.6
NEK4-201ENST00000233027 TCF24Q7RTU0 167 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 CLEC7AQ9BXN2 247 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 CHODLQ9H9P2 273 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 ERASQ7Z444 233 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 LOC105371242A0A075B767 164 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 IGHV1-69-2A0A0G2JMI3 117 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 GATA2P23769 480 aaPredicted RBP11.32□□□□□ -0.6
NEK4-201ENST00000233027 OR13A1Q8NGR1 328 aa11.32□□□□□ -0.6
NEK4-201ENST00000233027 FAM19A2Q8N3H0 131 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 TCF23Q7RTU1 214 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 FGF11Q92914 225 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 GALNT14Q96FL9 552 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 C19orf24Q9BVV8 132 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 SCN8AQ9UQD0 1980 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 LRRC37AA6NMS7 1700 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 A0A1W2PR77 199 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 TMEM250H0YL14 139 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 VENTXO95231 258 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 STARD6P59095 220 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 LINC00114Q6XXX2 140 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 MIR17HGQ75NE6 70 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 RNF126Q9BV68 326 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 MTCL1Q9Y4B5 1905 aaKnown RBP11.31□□□□□ -0.6
NEK4-201ENST00000233027 NPIPB13A6NJU9 1138 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 NPIPB4C9JG80 1138 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 NPIPB11E5RHQ5 1161 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 NPIPB7O75200 414 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 SFXN3Q9BWM7 321 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 COLQQ9Y215 455 aaPredicted RBP11.31□□□□□ -0.6
NEK4-201ENST00000233027 TRAV8-6A0A0B4J262 113 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 IGFBP3P17936 291 aaPredicted RBP11.31□□□□□ -0.6
NEK4-201ENST00000233027 TMEM70Q9BUB7 260 aa11.31□□□□□ -0.6
NEK4-201ENST00000233027 PCP4P48539 62 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 DMRTA1Q5VZB9 504 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 MRPL13Q9BYD1 178 aaKnown RBP11.3□□□□□ -0.6
NEK4-201ENST00000233027 PATJQ8NI35 1801 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 ATXN7O15265 892 aaPredicted RBP11.3□□□□□ -0.6
NEK4-201ENST00000233027 NEUROG3Q9Y4Z2 214 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 SPTBP11277 2137 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 HIST1H1AQ02539 215 aaPredicted RBP11.3□□□□□ -0.6
NEK4-201ENST00000233027 DNASE2BQ8WZ79 361 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 IFI27L2Q9H2X8 130 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 PLSCR2Q9NRY7 297 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 MYOFQ9NZM1 2061 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 A1L4Q6 167 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 APOHP02749 345 aaPredicted RBP11.3□□□□□ -0.6
NEK4-201ENST00000233027 TFF1P04155 84 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
NEK4-201ENST00000233027 LINC01560Q8TB33 94 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 DDB2Q92466 427 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 C18orf12Q96KH6 178 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 CFHR5Q9BXR6 569 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 ZNF703Q9H7S9 590 aaPredicted RBP11.3□□□□□ -0.6
NEK4-201ENST00000233027 NDUFA2O43678 99 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 CELA3BP08861 270 aa11.3□□□□□ -0.6
NEK4-201ENST00000233027 TBR1Q16650 682 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 ZNF414Q96IQ9 312 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 SDF2L1Q9HCN8 221 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 FOXA2Q9Y261 457 aaPredicted RBP11.29□□□□□ -0.6
NEK4-201ENST00000233027 RNF115Q9Y4L5 304 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 PRR32B1ATL7 298 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 EMP1P54849 157 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 PRB3Q04118 309 aaPredicted RBP11.29□□□□□ -0.6
NEK4-201ENST00000233027 DUX5Q96PT3 197 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 LINC00470Q9BZP3 86 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 PSME4Q14997 1843 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 IGHV3OR16-8A0A075B7F1 116 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 UCP1P25874 307 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 FBXL15Q9H469 300 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 A0A1B0GTI1 187 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 PEX7O00628 323 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 NPPCP23582 126 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 WDR82Q6UXN9 313 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 FDCSPQ8NFU4 85 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 GATAD1Q8WUU5 269 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 EEF1AKMT3Q96AZ1 226 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 LINC00587B1AMM8 73 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 ZNF525Q8N782 197 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 FAM216BQ8N7L0 139 aa11.29□□□□□ -0.6
NEK4-201ENST00000233027 PDCD11Q14690 1871 aaKnown RBP11.28□□□□□ -0.6
NEK4-201ENST00000233027 MEIG1Q5JSS6 88 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 LY6G6FQ5SQ64 297 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 Q6ZT83 130 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 ZNF418Q8TF45 676 aaPredicted RBP11.28□□□□□ -0.6
NEK4-201ENST00000233027 LYZL4Q96KX0 146 aa11.28□□□□□ -0.6
NEK4-201ENST00000233027 PRELID3AQ96N28 172 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms