RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 FAM209BQ5JX69 171 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 LINC00305Q7Z4B0 112 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 SFTPCP11686 197 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 CBLN1P23435 193 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 GOLT1AQ6ZVE7 132 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 C9orf106Q8NAJ2 232 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 FGFBP3Q8TAT2 258 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 IGHV3OR16-10A0A075B7F0 116 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 SRP19P09132 144 aaKnown RBP13.63□□□□□ -0.23
HDAC5-201ENST00000225983 LY6EQ16553 131 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 OR10J6PQ8NGY7 276 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 H0YIZ8 118 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 CGAP01215 116 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 RNFT1Q5M7Z0 435 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 TMEM106BQ9NUM4 274 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 S4R3C0 116 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 TMEM250H0YL14 139 aa13.62□□□□□ -0.23
HDAC5-201ENST00000225983 KLF7O75840 302 aaPredicted RBP13.62□□□□□ -0.23
HDAC5-201ENST00000225983 LEPROTL1O95214 131 aa13.62□□□□□ -0.23
HDAC5-201ENST00000225983 CCL1P22362 96 aa13.62□□□□□ -0.23
HDAC5-201ENST00000225983 TM4SF20Q53R12 229 aa13.62□□□□□ -0.23
HDAC5-201ENST00000225983 C9orf172C9J069 976 aa13.62□□□□□ -0.23
HDAC5-201ENST00000225983 LIPFP07098 398 aa13.62□□□□□ -0.23
HDAC5-201ENST00000225983 C18orf12Q96KH6 178 aa13.62□□□□□ -0.23
HDAC5-201ENST00000225983 ZCCHC14Q8WYQ9 949 aaKnown RBP13.62□□□□□ -0.23
HDAC5-201ENST00000225983 IGLV3-32A0A0A0MS00 114 aa13.62□□□□□ -0.23
HDAC5-201ENST00000225983 TCF21O43680 179 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 DDTP30046 118 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 MRPL32Q9BYC8 188 aaKnown RBP13.61□□□□□ -0.23
HDAC5-201ENST00000225983 ELOVL5Q9NYP7 299 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 TMEM56-RWDD3S4R434 201 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 IL4P05112 153 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 UQCRFS1P47985 274 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 CYP2G1PQ6ZSU1 146 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 ATOH7Q8N100 152 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 ZMAT5Q9UDW3 170 aaKnown RBP13.61□□□□□ -0.23
HDAC5-201ENST00000225983 IGHV3OR16-13A0A075B7E8 117 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 IGHV3-74A0A0B4J1X5 117 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 B9A039 149 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 TMEM30BQ3MIR4 351 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 COL5A1-AS1Q5SY13 56 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 GATAD1Q8WUU5 269 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 CDC42EP3Q9UKI2 254 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 TRBV6-7A0A0A0MS04 114 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 SLC17A3O00476 420 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 ATP5G3P48201 142 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 DLX1P56177 255 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 BSPH1Q075Z2 132 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 LYRM7Q5U5X0 104 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 TMEM105Q8N8V8 129 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 ZNF502Q8TBZ5 544 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 GGACTQ9BVM4 153 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 C19orf24Q9BVV8 132 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 FBLN5Q9UBX5 448 aa13.61□□□□□ -0.23
HDAC5-201ENST00000225983 CEP250Q9BV73 2442 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 IQCF6A8MYZ5 107 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 IGHV3-23P01764 117 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 CSRP2Q16527 193 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 ZNF525Q8N782 197 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 MRPS18CQ9Y3D5 142 aaKnown RBP13.6□□□□□ -0.23
HDAC5-201ENST00000225983 KBTBD11-OT1A0A1B0GTJ5 212 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 OR4B1Q8NGF8 309 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 CLDND2Q8NHS1 167 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 IFI27L2Q9H2X8 130 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 SCO2A0A1W2PP80 73 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 GATA2P23769 480 aaPredicted RBP13.6□□□□□ -0.23
HDAC5-201ENST00000225983 FAM89BQ8N5H3 189 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 FBXL15Q9H469 300 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 TRAV30A0A087WSZ9 112 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 NPIPB11E5RHQ5 1161 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 CIDEAO60543 219 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 APOBEC3AP31941 199 aaPredicted RBP13.6□□□□□ -0.23
HDAC5-201ENST00000225983 CHODLQ9H9P2 273 aa13.6□□□□□ -0.23
HDAC5-201ENST00000225983 SOD3P08294 240 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 PSG9Q00887 426 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 C1orf162Q8NEQ5 155 aaPredicted RBP13.59□□□□□ -0.23
HDAC5-201ENST00000225983 IGKV3D-15A0A087WSY6 115 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 IGKV3-15P01624 115 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 ANOS1P23352 680 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 COMPP49747 757 aaPredicted RBP13.59□□□□□ -0.23
HDAC5-201ENST00000225983 C2orf83Q53S99 150 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 DNM1P46Q6ZS02 220 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 CBLN4Q9NTU7 201 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 AUP1Q9Y679 476 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 EBLN2Q6P2I7 272 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 MRPL20Q9BYC9 149 aaKnown RBP13.59□□□□□ -0.23
HDAC5-201ENST00000225983 SIP14410 1827 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 CX3CL1P78423 397 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 PRB3Q04118 309 aaPredicted RBP13.59□□□□□ -0.23
HDAC5-201ENST00000225983 ABHD17AQ96GS6 310 aa13.59□□□□□ -0.23
HDAC5-201ENST00000225983 SNRNP200O75643 2136 aaKnown RBP13.58□□□□□ -0.23
HDAC5-201ENST00000225983 TRAV24A0A0B4J272 114 aa13.58□□□□□ -0.23
HDAC5-201ENST00000225983 ZIC4Q8N9L1 334 aa13.58□□□□□ -0.23
HDAC5-201ENST00000225983 ZNF318Q5VUA4 2279 aa13.58□□□□□ -0.24
HDAC5-201ENST00000225983 KIF26BQ2KJY2 2108 aa13.58□□□□□ -0.24
HDAC5-201ENST00000225983 ARHGEF17Q96PE2 2063 aaPredicted RBP13.58□□□□□ -0.24
HDAC5-201ENST00000225983 FBLL1A6NHQ2 334 aaKnown RBP13.58□□□□□ -0.24
HDAC5-201ENST00000225983 VENTXO95231 258 aa13.58□□□□□ -0.24
HDAC5-201ENST00000225983 CLPSP04118 112 aa13.58□□□□□ -0.24
HDAC5-201ENST00000225983 FOXG1P55316 489 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms