RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 TREML4Q6UXN2 200 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 INTS1Q8N201 2190 aaKnown RBP11.94□□□□□ -0.5
SFXN3-201ENST00000224807 ZNF83P51522 516 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 BRWD1-AS2P59051 145 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 MGST2Q99735 147 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 C20orf144Q9BQM9 153 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 KCNIP2Q9NS61 270 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 SLC35D1Q9NTN3 355 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 IL36BQ9NZH7 164 aa11.94□□□□□ -0.5
SFXN3-201ENST00000224807 HELTA6NFD8 242 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 AGFG2O95081 481 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 GPR12P47775 334 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 FOXL1Q12952 345 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 RNPS1Q15287 305 aaKnown RBP11.93□□□□□ -0.5
SFXN3-201ENST00000224807 ACSF3Q4G176 576 aaPredicted RBP11.93□□□□□ -0.5
SFXN3-201ENST00000224807 LEMD1Q68G75 181 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 TRAT1Q6PIZ9 186 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 ZNF645Q8N7E2 425 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 OR13A1Q8NGR1 328 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 SPSB4Q96A44 273 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 PMS2P5A8MQ11 134 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 J3QT63 122 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 IGFBP2P18065 325 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 GCHFRP30047 84 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 Q0VFX4 171 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 ZNF497Q6ZNH5 498 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 OR2M7Q8NG81 312 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 POM121L2Q96KW2 1035 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 DYSFO75923 2080 aa11.93□□□□□ -0.5
SFXN3-201ENST00000224807 IGHV3OR15-7A0A075B7D8 119 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A10PA6NDY2 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A18PA6NE21 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A16PA6NEW6 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A20PA6NIJ5 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A8PA6NJQ4 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A7PA6NKC0 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A22PA8MWA6 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A12PA8MX19 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A5PA8MXJ8 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A23PA8MXZ1 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 H3BTX0 84 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A15PP0C7V4 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A13PP0C7W8 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A14PP0C7W9 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM90A24PP0C7X0 464 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 COMPP49747 757 aaPredicted RBP11.92□□□□□ -0.5
SFXN3-201ENST00000224807 ATP6V1FQ16864 119 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 STPG3Q8N7X2 389 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 Q8NFD4 153 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 C22orf15Q8WYQ4 148 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 RTL8AQ9BWD3 113 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 UQCR10Q9UDW1 63 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 TIMM9Q9Y5J7 89 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 A0A1W2PS18 150 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 LINC00614P0C842 121 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 RPL8P62917 257 aaKnown RBP11.92□□□□□ -0.5
SFXN3-201ENST00000224807 COTL1Q14019 142 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 UTF1Q5T230 341 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 Q6ZR03 302 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 CENPVQ7Z7K6 275 aaPredicted RBP11.92□□□□□ -0.5
SFXN3-201ENST00000224807 C1orf174Q8IYL3 243 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 OR2Y1Q8NGV0 311 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 ZNF596Q8TC21 504 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 GMPPAQ96IJ6 420 aaPredicted RBP11.92□□□□□ -0.5
SFXN3-201ENST00000224807 RNF2Q99496 336 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 ALKBH7Q9BT30 221 aaPredicted RBP11.92□□□□□ -0.5
SFXN3-201ENST00000224807 ZNF355PQ9NSJ1 428 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 LOXL2Q9Y4K0 774 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 NBASA2RRP1 2371 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 USF1P22415 310 aaPredicted RBP11.92□□□□□ -0.5
SFXN3-201ENST00000224807 MFAP2P55001 183 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 UBE2NP61088 152 aaKnown RBP11.92□□□□□ -0.5
SFXN3-201ENST00000224807 SRSF7Q16629 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
SFXN3-201ENST00000224807 LYG1Q8N1E2 194 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 OR4B1Q8NGF8 309 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 FAM168AQ92567 244 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 EAF1Q96JC9 268 aaPredicted RBP11.92□□□□□ -0.5
SFXN3-201ENST00000224807 GGTLC1Q9BX51 225 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 GP6Q9HCN6 339 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 WNK2Q9Y3S1 2297 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 LAMA5O15230 3695 aa11.92□□□□□ -0.5
SFXN3-201ENST00000224807 MED13LQ71F56 2210 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 CACNA1HO95180 2353 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 M0R2Z0 102 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 YPEL1O60688 119 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 TIGITQ495A1 244 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 YPEL2Q96QA6 119 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 CLEC7AQ9BXN2 247 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 PARD6GQ9BYG4 376 aaPredicted RBP11.91□□□□□ -0.5
SFXN3-201ENST00000224807 WASHC3Q9Y3C0 194 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 TMEM30CPA0ZSE6 113 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 CXorf1O96002 111 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 IGLC2P0DOY2 106 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 IGLC3P0DOY3 106 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 ZNF137PP52743 207 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 STUMQ69YW2 141 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 ZNF841Q6ZN19 808 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 KCNE4Q8WWG9 221 aa11.91□□□□□ -0.5
SFXN3-201ENST00000224807 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms