RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 PCSK4Q6UW60 755 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 PSMG3Q9BT73 122 aaPredicted RBP9.74□□□□□ -0.85
NOD1-201ENST00000222823 CHODLQ9H9P2 273 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 TMEM106BQ9NUM4 274 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 FBLN5Q9UBX5 448 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 FOXD3Q9UJU5 478 aaPredicted RBP9.74□□□□□ -0.85
NOD1-201ENST00000222823 TMEM56-RWDD3S4R434 201 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 DIRC3C9JPN6 131 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 WBP1Q96G27 269 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 TBX15Q96SF7 602 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 C19orf24Q9BVV8 132 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 TRAV30A0A087WSZ9 112 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 IGHV2OR16-5A0A0B4J2B6 119 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 KLF7O75840 302 aaPredicted RBP9.74□□□□□ -0.85
NOD1-201ENST00000222823 HLA-DQA1P01909 254 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 AGAP20933 346 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 IGHV1-2P23083 117 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 WDR25Q64LD2 544 aaPredicted RBP9.74□□□□□ -0.85
NOD1-201ENST00000222823 ZNF343Q6P1L6 599 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 OR51M1Q9H341 326 aa9.74□□□□□ -0.85
NOD1-201ENST00000222823 IGLV3-32A0A0A0MS00 114 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 ACAA1P09110 424 aaPredicted RBP9.73□□□□□ -0.85
NOD1-201ENST00000222823 CD81P60033 236 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 WDYHV1Q96HA8 205 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 KLHDC3Q9BQ90 382 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 PARLQ9H300 379 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 FANCMQ8IYD8 2048 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 LHX2P50458 406 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 TM4SF20Q53R12 229 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 FAM216BQ8N7L0 139 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 OR13A1Q8NGR1 328 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 OR10J6PQ8NGY7 276 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 A8MXK9 166 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 RNF224P0DH78 156 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 CLDN18P56856 261 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 FXYD3Q14802 87 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 ABLIM2Q6H8Q1 611 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 FAM166AQ6J272 317 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 OSR1Q8TAX0 266 aaPredicted RBP9.73□□□□□ -0.85
NOD1-201ENST00000222823 RCC1LQ96I51 464 aaKnown RBP9.73□□□□□ -0.85
NOD1-201ENST00000222823 HSPB9Q9BQS6 159 aa9.73□□□□□ -0.85
NOD1-201ENST00000222823 RTBDNQ9BSG5 229 aaPredicted RBP9.73□□□□□ -0.85
NOD1-201ENST00000222823 IGHV3-35A0A0C4DH35 117 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 IGKV1-9A0A0C4DH69 117 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 LOC389332A0A1B0GUA5 103 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 CGB1A6NKQ9 187 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 TMEM250H0YL14 139 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 MAS1LP35410 378 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 EBLN2Q6P2I7 272 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 DEPPQ9NTK1 212 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 MPDZO75970 2070 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 TRAV14DV4A0A0A6YYC5 116 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 CXorf65A6NEN9 183 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 H3BTX0 84 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 SRSF9Q13242 221 aaKnown RBP eCLIP9.72□□□□□ -0.85
NOD1-201ENST00000222823 TWIST1Q15672 202 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 C9orf106Q8NAJ2 232 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 SGK494Q96LW2 274 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 DCTN5Q9BTE1 182 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 C17orf98A8MV24 154 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 RRHO14718 337 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 CA2P00918 260 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 CELA3BP08861 270 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 RELBQ01201 579 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 LYRM7Q5U5X0 104 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 ZNF738Q8NE65 137 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 IFITM10A6NMD0 228 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 MPTX1A8MV57 137 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 EGR1P18146 543 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 DLX1P56177 255 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 TMEM177Q53S58 311 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 LY6G6FQ5SQ64 297 aa9.72□□□□□ -0.85
NOD1-201ENST00000222823 PEAR1Q5VY43 1037 aaPredicted RBP9.72□□□□□ -0.85
NOD1-201ENST00000222823 HEATR1Q9H583 2144 aaKnown RBP9.72□□□□□ -0.85
NOD1-201ENST00000222823 NPIPB11E5RHQ5 1161 aa9.71□□□□□ -0.85
NOD1-201ENST00000222823 MPZP25189 248 aa9.71□□□□□ -0.85
NOD1-201ENST00000222823 CKS2P33552 79 aa9.71□□□□□ -0.85
NOD1-201ENST00000222823 PKIAP61925 76 aa9.71□□□□□ -0.85
NOD1-201ENST00000222823 FAM57AQ8TBR7 257 aa9.71□□□□□ -0.85
NOD1-201ENST00000222823 ZNF319Q9P2F9 582 aa9.71□□□□□ -0.85
NOD1-201ENST00000222823 CBY1Q9Y3M2 126 aa9.71□□□□□ -0.85
NOD1-201ENST00000222823 KIAA2026Q5HYC2 2103 aa9.71□□□□□ -0.85
NOD1-201ENST00000222823 FER1L5A0AVI2 2057 aa9.71□□□□□ -0.85
NOD1-201ENST00000222823 SS18L1O75177 396 aaPredicted RBP9.71□□□□□ -0.86
NOD1-201ENST00000222823 FOXH1O75593 365 aa9.71□□□□□ -0.86
NOD1-201ENST00000222823 CA7P43166 264 aa9.71□□□□□ -0.86
NOD1-201ENST00000222823 DPM3Q9P2X0 92 aa9.71□□□□□ -0.86
NOD1-201ENST00000222823 CDC42EP3Q9UKI2 254 aa9.71□□□□□ -0.86
NOD1-201ENST00000222823 CD99P14209 185 aa9.71□□□□□ -0.86
NOD1-201ENST00000222823 GCHFRP30047 84 aa9.71□□□□□ -0.86
NOD1-201ENST00000222823 PIMREGQ9BSJ6 248 aa9.71□□□□□ -0.86
NOD1-201ENST00000222823 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.86
NOD1-201ENST00000222823 KBTBD11-OT1A0A1B0GTJ5 212 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 PQLC2LA1A4F0 135 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 IQCF6A8MYZ5 107 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 TM4SF5O14894 197 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 CFPP27918 469 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 LY6EQ16553 131 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 ZNF841Q6ZN19 808 aa9.7□□□□□ -0.86
NOD1-201ENST00000222823 TICRRQ7Z2Z1 1910 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms