RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SEPSECSQ9HD40 501 aaKnown RBP12.04□□□□□ -0.48
CNOT3-201ENST00000221232 PHOX2AO14813 284 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 TMPRSS2O15393 492 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 GATA2P23769 480 aaPredicted RBP12.03□□□□□ -0.48
CNOT3-201ENST00000221232 GAMTQ14353 236 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 GGTLC1Q9BX51 225 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 TET2Q6N021 2002 aaPredicted RBP12.03□□□□□ -0.48
CNOT3-201ENST00000221232 XKRY2A2RUG3 117 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 TM4SF5O14894 197 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 KLK10O43240 276 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 CA2P00918 260 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 IGHV1-46P01743 117 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 IGKV1-16P04430 117 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 REG1BP48304 166 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 ARSJQ5FYB0 599 aaPredicted RBP12.03□□□□□ -0.48
CNOT3-201ENST00000221232 HIST1H2BLQ99880 126 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 SRD5A3Q9H8P0 318 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 RNF7Q9UBF6 113 aa12.03□□□□□ -0.48
CNOT3-201ENST00000221232 TRGV10A0A0A0MS01 117 aa12.02□□□□□ -0.48
CNOT3-201ENST00000221232 SCO2A0A1W2PP80 73 aa12.02□□□□□ -0.48
CNOT3-201ENST00000221232 LHBP01229 141 aa12.02□□□□□ -0.48
CNOT3-201ENST00000221232 RPP30P78346 268 aaKnown RBP12.02□□□□□ -0.48
CNOT3-201ENST00000221232 OR2T10Q8NGZ9 312 aa12.02□□□□□ -0.48
CNOT3-201ENST00000221232 C1orf159Q96HA4 380 aa12.02□□□□□ -0.48
CNOT3-201ENST00000221232 ENY2Q9NPA8 101 aa12.02□□□□□ -0.48
CNOT3-201ENST00000221232 TUBG2Q9NRH3 451 aa12.02□□□□□ -0.48
CNOT3-201ENST00000221232 RELNP78509 3460 aa12.02□□□□□ -0.49
CNOT3-201ENST00000221232 KBTBD11-OT1A0A1B0GTJ5 212 aa12.02□□□□□ -0.49
CNOT3-201ENST00000221232 F2RL2O00254 374 aa12.02□□□□□ -0.49
CNOT3-201ENST00000221232 WFDC8Q8IUA0 241 aa12.02□□□□□ -0.49
CNOT3-201ENST00000221232 OR4S2Q8NH73 311 aa12.02□□□□□ -0.49
CNOT3-201ENST00000221232 HRASP01112 189 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 IGFBP2P18065 325 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 SELENOVP59797 346 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 LINC01551Q86U37 167 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 LRFN3Q9BTN0 628 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 ZNF320A2RRD8 509 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 SRRM4A7MD48 611 aaKnown RBP12.01□□□□□ -0.49
CNOT3-201ENST00000221232 IL6RP08887 468 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-201ENST00000221232 NPY1RP25929 384 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 C1orf185Q5T7R7 199 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 ANKRD11Q6UB99 2663 aaPredicted RBP12.01□□□□□ -0.49
CNOT3-201ENST00000221232 A0A1B0GUS0 222 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 RBFOX2O43251 390 aaKnown RBP eCLIP12.01□□□□□ -0.499e-17■■■■□ 22.8
CNOT3-201ENST00000221232 TCF23Q7RTU1 214 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 SLC24A4Q8NFF2 622 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 OR4P4Q8NGL7 312 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 DDB2Q92466 427 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 YTHDF2Q9Y5A9 579 aaKnown RBP12.01□□□□□ -0.49
CNOT3-201ENST00000221232 OR51B2Q9Y5P1 312 aa12.01□□□□□ -0.49
CNOT3-201ENST00000221232 TRBV20OR9-2A0A075B6H5 130 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 IGHV3-48P01763 117 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 SNRPCP09234 159 aaKnown RBP12□□□□□ -0.49
CNOT3-201ENST00000221232 CGB3P0DN86 165 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 CGB7P0DN87 165 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 PMS2P11Q13670 270 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 ZGRF1Q86YA3 2104 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 STPG3Q8N7X2 389 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 ZCCHC14Q8WYQ9 949 aaKnown RBP12□□□□□ -0.49
CNOT3-201ENST00000221232 GAFA1Q96PS6 74 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 NPVFQ9HCQ7 196 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 PITPNC1Q9UKF7 332 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 PTPRBP23467 1997 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
CNOT3-201ENST00000221232 OPRK1P41145 380 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 RBMXL3Q8N7X1 1067 aaKnown RBP12□□□□□ -0.49
CNOT3-201ENST00000221232 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 IDI2-AS1Q9NZ38 188 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 ZNF292O60281 2723 aa12□□□□□ -0.49
CNOT3-201ENST00000221232 TPRP12270 2363 aaKnown RBP11.99□□□□□ -0.49
CNOT3-201ENST00000221232 C15orf61A6NNL5 157 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 PRSS46E5RG02 174 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 CCL3L1P16619 93 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 CD40P25942 277 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 BPIFB3P59826 476 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 HSPE1P61604 102 aaKnown RBP11.99□□□□□ -0.49
CNOT3-201ENST00000221232 PRB3Q04118 309 aaPredicted RBP11.99□□□□□ -0.49
CNOT3-201ENST00000221232 OR10W1Q8NGF6 305 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 DMRT1Q9Y5R6 373 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 A0A1B0GWJ7 208 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 ZNF705GA8MUZ8 300 aaPredicted RBP11.99□□□□□ -0.49
CNOT3-201ENST00000221232 J3QR06 171 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 CFHR2P36980 270 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 EFNB3Q15768 340 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 TP53TG5Q9Y2B4 290 aa11.99□□□□□ -0.49
CNOT3-201ENST00000221232 BSNQ9UPA5 3926 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 SLC17A3O00476 420 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 AMBPP02760 352 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 IRF2P14316 349 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 GPX4P36969 197 aaPredicted RBP11.98□□□□□ -0.49
CNOT3-201ENST00000221232 RAB7AP51149 207 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 CR1LQ2VPA4 569 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 UNQ6494/PRO21346Q6UXR6 183 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 MIR17HGQ75NE6 70 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 OR1P1Q8NH06 330 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 SGMS2Q8NHU3 365 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 OCC1Q8TAD7 63 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 ANAPC16Q96DE5 110 aa11.98□□□□□ -0.49
CNOT3-201ENST00000221232 PRDM13Q9H4Q3 707 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms