RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 FAM169BQ8N8A8 192 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 VSIG10L2P0DP72 767 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 ZNF250P15622 560 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 KLK2P20151 261 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 MOSP00540 346 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 KIR3DL3Q8N743 410 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 ZNF414Q96IQ9 312 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 C18orf15Q96N68 181 aa12.69□□□□□ -0.38
UBR5-201ENST00000220959 STRCQ7RTU9 1775 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 RARRES2Q99969 163 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 GPR132Q9UNW8 380 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 PLXNB2O15031 1838 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 HBBP68871 147 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 SCGB3A1Q96QR1 104 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 SPAG8Q99932 426 aaPredicted RBP12.68□□□□□ -0.38
UBR5-201ENST00000220959 NPFFR1Q9GZQ6 430 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 COX5BP10606 129 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 P2RY4P51582 365 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 RIPPLY2Q5TAB7 128 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 ZNF324BQ6AW86 544 aaPredicted RBP12.68□□□□□ -0.38
UBR5-201ENST00000220959 YAE1D1Q9NRH1 226 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 TRAV24A0A0B4J272 114 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 ATOH7Q8N100 152 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 NEUROG1Q92886 237 aa12.68□□□□□ -0.38
UBR5-201ENST00000220959 FOCADQ5VW36 1801 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 ATP5LO75964 103 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 C1QL1O75973 258 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 PRSS23O95084 383 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 IGKV1D-33P01593 117 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 IGKV1-33P01594 117 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 HOXA5P20719 270 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 PLSCR2Q9NRY7 297 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 ZNF688P0C7X2 276 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 CXCL2P19875 107 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 RNASE4P34096 147 aaKnown RBP12.67□□□□□ -0.38
UBR5-201ENST00000220959 TCF23Q7RTU1 214 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 FDCSPQ8NFU4 85 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 SDF2L1Q9HCN8 221 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 NXT2Q9NPJ8 142 aaKnown RBP12.67□□□□□ -0.38
UBR5-201ENST00000220959 DPM3Q9P2X0 92 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 ATP5IP56385 69 aaPredicted RBP12.67□□□□□ -0.38
UBR5-201ENST00000220959 SMIM8Q96KF7 97 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 HS3ST3B1Q9Y662 390 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 PPP1R27Q86WC6 154 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 FBXL7Q9UJT9 491 aa12.67□□□□□ -0.38
UBR5-201ENST00000220959 CENPWQ5EE01 88 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 TIMM23BQ5SRD1 257 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 ERGP11308 486 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 IRF3Q14653 427 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 SLC25A45Q8N413 288 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 FOXA2Q9Y261 457 aaPredicted RBP12.66□□□□□ -0.38
UBR5-201ENST00000220959 TEX45Q8NA69 505 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 OR5AN1Q8NGI8 311 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 HIST1H2BAQ96A08 127 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 JMJD8Q96S16 334 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 PSMG3Q9BT73 122 aaPredicted RBP12.66□□□□□ -0.38
UBR5-201ENST00000220959 TGIF2-C20orf24A0A0A6YYL0 155 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 IGKV3D-20A0A0C4DH25 116 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 ATP1A1-AS1Q5TC04 95 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 TMEM106BQ9NUM4 274 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 FREM3P0C091 2139 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 COL22A1Q8NFW1 1626 aaPredicted RBP12.66□□□□□ -0.38
UBR5-201ENST00000220959 PROB1E7EW31 1015 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 PEX7O00628 323 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 LEMD1Q68G75 181 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 SRXN1Q9BYN0 137 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 GLRXP35754 106 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 ZNRF1Q8ND25 227 aa12.66□□□□□ -0.38
UBR5-201ENST00000220959 PHLDA1Q8WV24 401 aaPredicted RBP12.66□□□□□ -0.38
UBR5-201ENST00000220959 CA7P43166 264 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 TMEM95Q3KNT9 176 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 C7orf69Q9H7B7 122 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 NBEAP1P0C6P0 100 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 COX6A1P12074 109 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 CLEC19AQ6UXS0 136 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 RFLNBQ8N5W9 214 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 ZNF703Q9H7S9 590 aaPredicted RBP12.65□□□□□ -0.38
UBR5-201ENST00000220959 S4R3C0 116 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 GCHFRP30047 84 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 SAP25Q8TEE9 199 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 TBL2Q9Y4P3 447 aaKnown RBP12.65□□□□□ -0.38
UBR5-201ENST00000220959 EIF3GO75821 320 aaKnown RBP eCLIP12.65□□□□□ -0.38
UBR5-201ENST00000220959 TGFAP01135 160 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 HLA-DQB1P01920 261 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 GPR183P32249 361 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 LHFPL6Q9Y693 200 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 SAMD13Q5VXD3 122 aa12.65□□□□□ -0.38
UBR5-201ENST00000220959 ZNF79Q15937 498 aa12.65□□□□□ -0.39
UBR5-201ENST00000220959 SCN7AQ01118 1682 aa12.65□□□□□ -0.39
UBR5-201ENST00000220959 ABCA4P78363 2273 aa12.64□□□□□ -0.39
UBR5-201ENST00000220959 SIRT4Q9Y6E7 314 aaPredicted RBP12.64□□□□□ -0.39
UBR5-201ENST00000220959 H0YL77 283 aa12.64□□□□□ -0.39
UBR5-201ENST00000220959 TM4SF5O14894 197 aa12.64□□□□□ -0.39
UBR5-201ENST00000220959 DRAM1Q8N682 238 aa12.64□□□□□ -0.39
UBR5-201ENST00000220959 KCNS1Q96KK3 526 aa12.64□□□□□ -0.39
UBR5-201ENST00000220959 RBM38Q9H0Z9 239 aaKnown RBP12.64□□□□□ -0.39
UBR5-201ENST00000220959 SAA1P0DJI8 122 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms