RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 PTPN13Q12923 2485 aa17.6■□□□□ 0.41
FMR1-201ENST00000218200 RPL23P62829 140 aaKnown RBP17.6■□□□□ 0.41
FMR1-201ENST00000218200 INO80CQ6PI98 192 aaPredicted RBP17.6■□□□□ 0.41
FMR1-201ENST00000218200 NPIPB3Q92617 1050 aa17.6■□□□□ 0.41
FMR1-201ENST00000218200 ACACBO00763 2458 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 IGKV1-12A0A0C4DH73 117 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 C5orf52A6NGY3 159 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 IGKV1D-12P01611 117 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 ACP1P24666 158 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 FGFBP3Q8TAT2 258 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 NPCDR1Q9BY65 106 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 A8MWL6 223 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 FOXG1P55316 489 aaPredicted RBP17.59■□□□□ 0.41
FMR1-201ENST00000218200 COX19Q49B96 90 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 C10orf128Q5T292 105 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 FAM214BQ7L5A3 538 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 STPG3Q8N7X2 389 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 OR4B1Q8NGF8 309 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 PMCHL2Q9BQD1 86 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 CSPG4Q6UVK1 2322 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 SYNGR3O43761 229 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 PERPQ96FX8 193 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 HILPDAQ9Y5L2 63 aa17.59■□□□□ 0.41
FMR1-201ENST00000218200 K7N7A8 449 aa17.58■□□□□ 0.41
FMR1-201ENST00000218200 PRB3Q04118 309 aaPredicted RBP17.58■□□□□ 0.41
FMR1-201ENST00000218200 TMEM177Q53S58 311 aa17.58■□□□□ 0.41
FMR1-201ENST00000218200 F11RQ9Y624 299 aaKnown RBP17.58■□□□□ 0.41
FMR1-201ENST00000218200 IGLV3-12A0A075B6K2 115 aa17.58■□□□□ 0.41
FMR1-201ENST00000218200 ZNF841Q6ZN19 808 aa17.58■□□□□ 0.41
FMR1-201ENST00000218200 CD5P06127 495 aa17.58■□□□□ 0.4
FMR1-201ENST00000218200 GPR6P46095 362 aaPredicted RBP17.58■□□□□ 0.4
FMR1-201ENST00000218200 HGFACQ04756 655 aa17.58■□□□□ 0.4
FMR1-201ENST00000218200 ZNF525Q8N782 197 aa17.58■□□□□ 0.4
FMR1-201ENST00000218200 GCHFRP30047 84 aa17.58■□□□□ 0.4
FMR1-201ENST00000218200 HSPE1P61604 102 aaKnown RBP17.58■□□□□ 0.4
FMR1-201ENST00000218200 RIGQ13278 110 aa17.58■□□□□ 0.4
FMR1-201ENST00000218200 SLC25A10Q9UBX3 287 aaPredicted RBP17.58■□□□□ 0.4
FMR1-201ENST00000218200 S4R3C0 116 aa17.58■□□□□ 0.4
FMR1-201ENST00000218200 NPIPB13A6NJU9 1138 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 NPIPB4C9JG80 1138 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 HYPMO75409 117 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 MOSP00540 346 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 TNFSF10P50591 281 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 HEPN1Q6WQI6 88 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 SIGLEC12Q96PQ1 595 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 COA4Q9NYJ1 87 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 CALYQ9NYX4 217 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 TBL2Q9Y4P3 447 aaKnown RBP17.57■□□□□ 0.4
FMR1-201ENST00000218200 MAS1LP35410 378 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 LRRC75BQ2VPJ9 315 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 HLA-DQA1P01909 254 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 ZNF524Q96C55 264 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 HIST1H2BLQ99880 126 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 PRDM14Q9GZV8 571 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 TNFRSF19Q9NS68 423 aa17.57■□□□□ 0.4
FMR1-201ENST00000218200 IGHV3OR16-13A0A075B7E8 117 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 IGHV3-74A0A0B4J1X5 117 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 DPRXA6NFQ7 191 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 MPDU1O75352 247 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 LBHQ53QV2 105 aaPredicted RBP17.56■□□□□ 0.4
FMR1-201ENST00000218200 SPSB4Q96A44 273 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 DEPPQ9NTK1 212 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 PRR14LQ5THK1 2151 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 GAGE10A6NGK3 116 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 UBE2CO00762 179 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 WISP1O95388 367 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 LINC00596Q86U02 117 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.56■□□□□ 0.4
FMR1-201ENST00000218200 K7ERU9 68 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 PRRX1P54821 245 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 RBM14Q96PK6 669 aaKnown RBP17.56■□□□□ 0.4
FMR1-201ENST00000218200 DNAJC4Q9NNZ3 241 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 SERF1AO75920 110 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 CA2P00918 260 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 MT-ND6P03923 174 aa17.56■□□□□ 0.4
FMR1-201ENST00000218200 GMPPAQ96IJ6 420 aaPredicted RBP17.56■□□□□ 0.4
FMR1-201ENST00000218200 COL4A3Q01955 1670 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 CELA3BP08861 270 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 RPL8P62917 257 aaKnown RBP17.55■□□□□ 0.4
FMR1-201ENST00000218200 FOXC1Q12948 553 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 OR8G5Q8NG78 346 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 A6NNC1 897 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 RAMP3O60896 148 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 OR4A8P0C604 315 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 IGFBP2P18065 325 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 SRSF12Q8WXF0 261 aaKnown RBP17.55■□□□□ 0.4
FMR1-201ENST00000218200 LSM10Q969L4 123 aaKnown RBP17.55■□□□□ 0.4
FMR1-201ENST00000218200 PSMG3Q9BT73 122 aaPredicted RBP17.55■□□□□ 0.4
FMR1-201ENST00000218200 THADAQ6YHU6 1953 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 IGHV3OR16-8A0A075B7F1 116 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A10PA6NDY2 464 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A18PA6NE21 464 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A16PA6NEW6 464 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A20PA6NIJ5 464 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A8PA6NJQ4 464 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A7PA6NKC0 464 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A22PA8MWA6 464 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A12PA8MX19 464 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A5PA8MXJ8 464 aa17.55■□□□□ 0.4
FMR1-201ENST00000218200 FAM90A23PA8MXZ1 464 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms