RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 TLN1Q9Y490 2541 aaKnown RBP8.13□□□□□ -1.11
CSTF1-201ENST00000217109 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.13□□□□□ -1.114e-6■□□□□ 9.7
CSTF1-201ENST00000217109 MALRD1Q5VYJ5 2156 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 TRAV3A0A0B4J244 114 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 FAM90A27PA6NNH2 459 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 TDGF1P13385 188 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 CRISP2P16562 243 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 TMEM14EPQ6UXP3 125 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 STPG3Q8N7X2 389 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 Q8NFD4 153 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 OR1P1Q8NH06 330 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 CMTM2Q8TAZ6 248 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 STARD4Q96DR4 205 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 FKBP11Q9NYL4 201 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 TIMM9Q9Y5J7 89 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 GRIFINA4D1Z8 144 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 CNN1P51911 297 aaKnown RBP8.12□□□□□ -1.11
CSTF1-201ENST00000217109 PRB3Q04118 309 aaPredicted RBP8.12□□□□□ -1.11
CSTF1-201ENST00000217109 FAM90A2PQ658T7 463 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 OR4A47Q6IF82 309 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 TGIF2LYQ8IUE0 185 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 TGIF2LXQ8IUE1 241 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 C1orf162Q8NEQ5 155 aaPredicted RBP8.12□□□□□ -1.11
CSTF1-201ENST00000217109 ARFGEF3Q5TH69 2177 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 PPIAL4EA0A075B759 164 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 SNURFLB1AK76 121 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 PPIAL4DF5H284 164 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 PPIAL4FP0DN26 164 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 TNXAQ16473 311 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 KRTAP27-1Q3LI81 207 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 HCP5Q6MZN7 132 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 DBX2Q6ZNG2 339 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 Q6ZR03 302 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 WDR31Q8NA23 367 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 OR4X1Q8NH49 305 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 LYPD6BQ8NI32 183 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 SRD5A3Q9H8P0 318 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 PPIAL4AQ9Y536 164 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 A0A1B0GW64 132 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 H0Y8G0 127 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 SLC17A3O00476 420 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 C1QTNF9P0C862 333 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 IGFBP2P18065 325 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 CRYBB3P26998 211 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 CAMPP49913 170 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 BPIFB3P59826 476 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 FXYD3Q14802 87 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 IQCJQ1A5X6 159 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 NHLRC2Q8NBF2 726 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 OR5B3Q8NH48 314 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 SGK494Q96LW2 274 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 IDI2-AS1Q9NZ38 188 aa8.12□□□□□ -1.11
CSTF1-201ENST00000217109 SAA2-SAA4A0A096LPE2 208 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 REG1AP05451 166 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 IL6RP08887 468 aaPredicted RBP8.11□□□□□ -1.11
CSTF1-201ENST00000217109 SAA2P0DJI9 122 aaPredicted RBP8.11□□□□□ -1.11
CSTF1-201ENST00000217109 MYOD1P15172 320 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
CSTF1-201ENST00000217109 ZNF726P1Q15940 193 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 HAPLN4Q86UW8 402 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 RPRMLQ8N4K4 120 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 GCSAMQ8N6F7 178 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 OR1B1Q8NGR6 318 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 OR1L8Q8NGR8 309 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 BORCS7Q96B45 105 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 MRPL37Q9BZE1 423 aaKnown RBP8.11□□□□□ -1.11
CSTF1-201ENST00000217109 TMEM167BQ9NRX6 74 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 TRAV1-1A0A0B4J248 108 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 CT45A6P0DMU7 189 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 CT45A5P0DMU8 189 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 CT45A7P0DMV0 189 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 ERVK11-1P61568 191 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 CT45A1Q5HYN5 189 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 C1orf174Q8IYL3 243 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 CT45A3Q8NHU0 189 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 DERL1Q9BUN8 251 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 SLC31A2O15432 143 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 CGAP01215 116 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 IGKV1D-33P01593 117 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 IGKV1-33P01594 117 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 SOD3P08294 240 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 CCL3L1P16619 93 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 CD81P60033 236 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 RANP62826 216 aaKnown RBP8.11□□□□□ -1.11
CSTF1-201ENST00000217109 RPEL1Q2QD12 228 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 KIAA1644Q3SXP7 199 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 PQLC2Q6ZP29 291 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 SSX7Q7RTT5 188 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 ZNF439Q8NDP4 499 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 OR1L6Q8NGR2 347 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 ZNF714Q96N38 554 aa8.11□□□□□ -1.11
CSTF1-201ENST00000217109 WDFY4Q6ZS81 3184 aa8.1□□□□□ -1.11
CSTF1-201ENST00000217109 KBTBD11-OT1A0A1B0GTJ5 212 aa8.1□□□□□ -1.11
CSTF1-201ENST00000217109 SRRM5B3KS81 715 aa8.1□□□□□ -1.11
CSTF1-201ENST00000217109 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.1□□□□□ -1.11
CSTF1-201ENST00000217109 SLC25A17O43808 307 aa8.1□□□□□ -1.11
CSTF1-201ENST00000217109 RBP4P02753 201 aa8.1□□□□□ -1.11
CSTF1-201ENST00000217109 SLC25A5P05141 298 aaKnown RBP8.1□□□□□ -1.11
CSTF1-201ENST00000217109 GCHFRP30047 84 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms