RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 EFNA4P52798 201 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 ELLP55199 621 aaPredicted RBP14.12□□□□□ -0.15
VRK1-201ENST00000216639 DIAPH2-AS1Q14236 149 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 NPCDR1Q9BY65 106 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 COMMD5Q9GZQ3 224 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 LOC105371242A0A075B767 164 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 TEX50A0A1B0GTY4 177 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 RBFOX3A6NFN3 312 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 BUB1B-PAK6H3BSN5 160 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 LGALS7P47929 136 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 PPT1P50897 306 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 RPL8P62917 257 aaKnown RBP14.12□□□□□ -0.15
VRK1-201ENST00000216639 BTN1A1Q13410 526 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 VMA21Q3ZAQ7 101 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 WDR83OSQ9Y284 106 aa14.12□□□□□ -0.15
VRK1-201ENST00000216639 SMCO3A2RU48 225 aa14.11□□□□□ -0.15
VRK1-201ENST00000216639 C22orf46C9J442 243 aa14.11□□□□□ -0.15
VRK1-201ENST00000216639 FAM157AC9JC47 383 aa14.11□□□□□ -0.15
VRK1-201ENST00000216639 M0R1W7 72 aa14.11□□□□□ -0.15
VRK1-201ENST00000216639 MDKP21741 143 aaPredicted RBP14.11□□□□□ -0.15
VRK1-201ENST00000216639 COX7A1P24310 79 aa14.11□□□□□ -0.15
VRK1-201ENST00000216639 TMEM167AQ8TBQ9 72 aa14.11□□□□□ -0.15
VRK1-201ENST00000216639 MBD3L1Q8WWY6 194 aa14.11□□□□□ -0.15
VRK1-201ENST00000216639 SCRT1Q9BWW7 348 aa14.11□□□□□ -0.15
VRK1-201ENST00000216639 VSIRQ9H7M9 311 aa14.11□□□□□ -0.15
VRK1-201ENST00000216639 C9JQL5 133 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 CCL20P78556 96 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 GUCA2BQ16661 112 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 ZNF787Q6DD87 383 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.1□□□□□ -0.15
VRK1-201ENST00000216639 OR1L8Q8NGR8 309 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 RPEQ96AT9 228 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 RCC1LQ96I51 464 aaKnown RBP14.1□□□□□ -0.15
VRK1-201ENST00000216639 INSIG2Q9Y5U4 225 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 PRSS46E5RG02 174 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 ENSAO43768 121 aaKnown RBP14.1□□□□□ -0.15
VRK1-201ENST00000216639 CA2P00918 260 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 FFAR4Q5NUL3 377 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 SP5Q6BEB4 398 aaPredicted RBP14.1□□□□□ -0.15
VRK1-201ENST00000216639 ATRAIDQ6UW56 229 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 SLC35B3Q9H1N7 401 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 SLC39A9Q9NUM3 307 aa14.1□□□□□ -0.15
VRK1-201ENST00000216639 A0A1W2PN81 502 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 OPN1MWP04001 364 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 OPN1MW2P0DN77 364 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 OPN1MW3P0DN78 364 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 MYOD1P15172 320 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 CHRNA7P36544 502 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 HNF4GQ14541 408 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 PNKDQ8N490 385 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 TMEM170AQ8WVE7 144 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 UNKLQ9H9P5 680 aaKnown RBP14.09□□□□□ -0.15
VRK1-201ENST00000216639 NPVFQ9HCQ7 196 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 KCNIP2Q9NS61 270 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 NBASA2RRP1 2371 aa14.09□□□□□ -0.15
VRK1-201ENST00000216639 DOCK11Q5JSL3 2073 aa14.08□□□□□ -0.15
VRK1-201ENST00000216639 IGHV1-3A0A0C4DH29 117 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 IGLV2-23P01705 113 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 ARF6P62330 175 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 ERHP84090 104 aaKnown RBP14.08□□□□□ -0.16
VRK1-201ENST00000216639 ACOT6Q3I5F7 207 aaPredicted RBP14.08□□□□□ -0.16
VRK1-201ENST00000216639 ACSM6Q6P461 480 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 LCN15Q6UWW0 184 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 MOB3BQ86TA1 216 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 OR4P4Q8NGL7 312 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 OR10G4Q8NGN3 311 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 OR10G9Q8NGN4 311 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 OR10G7Q8NGN6 311 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 TMA7Q9Y2S6 64 aaKnown RBP14.08□□□□□ -0.16
VRK1-201ENST00000216639 HIVEP3Q5T1R4 2406 aa14.08□□□□□ -0.16
VRK1-201ENST00000216639 TET2Q6N021 2002 aaPredicted RBP14.08□□□□□ -0.16
VRK1-201ENST00000216639 MAP1LC3B2A6NCE7 125 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 FNDC10F2Z333 226 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 CYB5BO43169 146 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 IFNA1P01562 189 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 ZNF726P1Q15940 193 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 HAGHQ16775 308 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 C2orf83Q53S99 150 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 ZNF506Q5JVG8 444 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 TREML4Q6UXN2 200 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 CLDND2Q8NHS1 167 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 RARRES2Q99969 163 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 ACTR3CQ9C0K3 210 aaPredicted RBP14.07□□□□□ -0.16
VRK1-201ENST00000216639 MAP1LC3BQ9GZQ8 125 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 NDUFA4L2Q9NRX3 87 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 CTXND1A0A1B0GTU2 59 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 INS-IGF2F8WCM5 200 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 CEACAM3P40198 252 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 DLX1P56177 255 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 RAB31Q13636 194 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 KHDC3LQ587J8 217 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 C1orf122Q6ZSJ8 110 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 Q8N7P7 452 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 TEX45Q8NA69 505 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 OR11H6Q8NGC7 330 aa14.07□□□□□ -0.16
VRK1-201ENST00000216639 IGHV3-72A0A0B4J1Y9 119 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 SLC25A17O43808 307 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 KALRNO60229 2985 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 NDUFS7O75251 213 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 HSPB1P04792 205 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms