RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ACY3Q96HD9 319 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 SNHG12Q9BXW3 62 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 MRPL37Q9BZE1 423 aaKnown RBP12.5□□□□□ -0.41
EFNB1-201ENST00000204961 MBNL3Q9NUK0 354 aaKnown RBP12.5□□□□□ -0.41
EFNB1-201ENST00000204961 TMEM140Q9NV12 185 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 MRPS18CQ9Y3D5 142 aaKnown RBP12.5□□□□□ -0.41
EFNB1-201ENST00000204961 PXMP4Q9Y6I8 212 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 IGKV1D-17A0A075B6S4 117 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 AHRRA9YTQ3 701 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 SS18L1O75177 396 aaPredicted RBP12.5□□□□□ -0.41
EFNB1-201ENST00000204961 TEX38Q6PEX7 206 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 MOB1BQ7L9L4 216 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 TP53TG5Q9Y2B4 290 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 ANKHD1Q8IWZ3 2542 aaKnown RBP12.5□□□□□ -0.41
EFNB1-201ENST00000204961 KMT2EQ8IZD2 1858 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 CA1P00915 261 aaPredicted RBP12.49□□□□□ -0.41
EFNB1-201ENST00000204961 NUTF2P61970 127 aaKnown RBP12.49□□□□□ -0.41
EFNB1-201ENST00000204961 Q6ZT83 130 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 HIPK2Q9H2X6 1198 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 SMDT1Q9H4I9 107 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 DCHS2Q6V1P9 2916 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 IGHV2OR16-5A0A0B4J2B6 119 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 IGHV1-18A0A0C4DH31 117 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 A0A1B0GW64 132 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 LGALS4P56470 323 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 HLA-DRB5Q30154 266 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 ACOT6Q3I5F7 207 aaPredicted RBP12.49□□□□□ -0.41
EFNB1-201ENST00000204961 NRN1LQ496H8 165 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 DOLPP1Q86YN1 238 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 OR10W1Q8NGF6 305 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 H1FXQ92522 213 aaKnown RBP12.49□□□□□ -0.41
EFNB1-201ENST00000204961 C2orf88Q9BSF0 95 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 K7EM74 188 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 TMPRSS2O15393 492 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 CGAP01215 116 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 REG1AP05451 166 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 IGFBP2P18065 325 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 ZNF90Q03938 601 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 CYP2G1PQ6ZSU1 146 aa12.49□□□□□ -0.41
EFNB1-201ENST00000204961 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
EFNB1-201ENST00000204961 PFN1P07737 140 aaKnown RBP12.48□□□□□ -0.41
EFNB1-201ENST00000204961 KITLGP21583 273 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 IL3RAP26951 378 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 TAAR6Q96RI8 345 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 ENY2Q9NPA8 101 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 PROCRQ9UNN8 238 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 PTPRQQ9UMZ3 2332 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 MDFIC2A0A1B0GVS7 189 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 IQCF6A8MYZ5 107 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 F2Z2F3 143 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 F6UZH7 168 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 DUTP33316 252 aaKnown RBP12.48□□□□□ -0.41
EFNB1-201ENST00000204961 NUBP1P53384 320 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 PNRC1Q12796 327 aaPredicted RBP12.48□□□□□ -0.41
EFNB1-201ENST00000204961 PRR27Q6MZM9 219 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 C19orf35Q6ZS72 473 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 OCC1Q8TAD7 63 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 ZDHHC11Q9H8X9 412 aa12.48□□□□□ -0.41
EFNB1-201ENST00000204961 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.48□□□□□ -0.41
EFNB1-201ENST00000204961 TRBV20OR9-2A0A075B6H5 130 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 MBP02144 154 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 IER3P46695 156 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 TREML4Q6UXN2 200 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 PRO3102Q9H379 93 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 C17orf112F2Z3M2 114 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 IGKV1-16P04430 117 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 HOXA6P31267 233 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 LINC00596Q86U02 117 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 GCSAMQ8N6F7 178 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 PSG5Q15238 335 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 C10orf55Q5SWW7 151 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 MRPL54Q6P161 138 aaKnown RBP12.47□□□□□ -0.41
EFNB1-201ENST00000204961 MIR17HGQ75NE6 70 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 WFDC8Q8IUA0 241 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 OR5R1Q8NH85 324 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 LINC00479Q96M42 142 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 SSBP3Q9BWW4 388 aaPredicted RBP12.47□□□□□ -0.41
EFNB1-201ENST00000204961 TCF19Q9Y242 345 aa12.47□□□□□ -0.41
EFNB1-201ENST00000204961 HRASP01112 189 aa12.46□□□□□ -0.41
EFNB1-201ENST00000204961 RPL31P62899 125 aaKnown RBP12.46□□□□□ -0.41
EFNB1-201ENST00000204961 MORN2Q502X0 79 aa12.46□□□□□ -0.41
EFNB1-201ENST00000204961 MGST2Q99735 147 aa12.46□□□□□ -0.41
EFNB1-201ENST00000204961 AGMATQ9BSE5 352 aa12.46□□□□□ -0.41
EFNB1-201ENST00000204961 YTHDF2Q9Y5A9 579 aaKnown RBP12.46□□□□□ -0.41
EFNB1-201ENST00000204961 B4DEV8 164 aa12.46□□□□□ -0.42
EFNB1-201ENST00000204961 CA2P00918 260 aa12.46□□□□□ -0.42
EFNB1-201ENST00000204961 KIR3DL3Q8N743 410 aa12.46□□□□□ -0.42
EFNB1-201ENST00000204961 TMEM18Q96B42 140 aa12.46□□□□□ -0.42
EFNB1-201ENST00000204961 UHRF2Q96PU4 802 aa12.46□□□□□ -0.42
EFNB1-201ENST00000204961 SRD5A3Q9H8P0 318 aa12.46□□□□□ -0.42
EFNB1-201ENST00000204961 PMS2P5A8MQ11 134 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 CCL3L1P16619 93 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 CRYBB3P26998 211 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 ERVFC1-1P60608 527 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 TDRG1Q3Y452 100 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 SLC35E4Q6ICL7 350 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 INO80CQ6PI98 192 aaPredicted RBP12.45□□□□□ -0.42
EFNB1-201ENST00000204961 TMEM68Q96MH6 324 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 NEU1Q99519 415 aa12.45□□□□□ -0.42
EFNB1-201ENST00000204961 RNASE7Q9H1E1 156 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms