RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 DOPEY1Q5JWR5 2465 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A10PA6NDY2 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A18PA6NE21 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A16PA6NEW6 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A20PA6NIJ5 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A8PA6NJQ4 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A7PA6NKC0 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A22PA8MWA6 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A12PA8MX19 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A5PA8MXJ8 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A23PA8MXZ1 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A15PP0C7V4 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A13PP0C7W8 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A14PP0C7W9 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FAM90A24PP0C7X0 464 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 GLRXP35754 106 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FXYD3Q14802 87 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 HERPUD1Q15011 391 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 RNF138Q8WVD3 245 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 FLYWCH2Q96CP2 140 aaKnown RBP10.08□□□□□ -0.8
CHPF2-201ENST00000035307 SMIM8Q96KF7 97 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 PLSCR4Q9NRQ2 329 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 DKK4Q9UBT3 224 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 ADGRG4Q8IZF6 3080 aa10.08□□□□□ -0.8
CHPF2-201ENST00000035307 PPIAL4EA0A075B759 164 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 PPIAL4DF5H284 164 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 RRHO14718 337 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 PPIAL4FP0DN26 164 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 ADCYAP1P18509 176 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 KIAA1644Q3SXP7 199 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 CORO2AQ92828 525 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 TXN2Q99757 166 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 TCF19Q9Y242 345 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 PPIAL4AQ9Y536 164 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 SERTM2A0A1B0GWG4 89 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 RAB29O14966 203 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 MLNRO43193 412 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 IER3P46695 156 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 Q6ZRM9 215 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 LINC00596Q86U02 117 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 OR4X1Q8NH49 305 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 TMEM18Q96B42 140 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 BORCS7Q96B45 105 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 MEGF10Q96KG7 1140 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 TMEM56Q96MV1 263 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 COL4A2P08572 1712 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 DPRXA6NFQ7 191 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 CSN3P07498 182 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 ARL3P36405 182 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 RPL30P62888 115 aaKnown RBP10.07□□□□□ -0.8
CHPF2-201ENST00000035307 TEPPQ6URK8 271 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 OR1L4Q8NGR5 311 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 EAF1Q96JC9 268 aaPredicted RBP10.07□□□□□ -0.8
CHPF2-201ENST00000035307 C18orf12Q96KH6 178 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 RNF115Q9Y4L5 304 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 INSIG2Q9Y5U4 225 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 C2CD3Q4AC94 2353 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 TRBV6-7A0A0A0MS04 114 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 HPRT1P00492 218 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 ARL14EPLP0DKL9 152 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 ARF6P62330 175 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 SAXO1Q8IYX7 474 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 ZNF383Q8NA42 475 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 SLC25A15Q9Y619 301 aa10.07□□□□□ -0.8
CHPF2-201ENST00000035307 IGHV3OR16-8A0A075B7F1 116 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 MYOD1P15172 320 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 ATP6V1FQ16864 119 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 DUX4L9Q6RFH8 374 aaPredicted RBP10.06□□□□□ -0.8
CHPF2-201ENST00000035307 WDR82Q6UXN9 313 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 C22orf34Q6ZV56 151 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 OR10G8Q8NGN5 311 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 GINS3Q9BRX5 216 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 PARLQ9H300 379 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 MS4A5Q9H3V2 200 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 TMSB15BA0A087X1C1 80 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 K7N7A8 449 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 CD24P25063 80 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 RPL29P47914 159 aaKnown RBP10.06□□□□□ -0.8
CHPF2-201ENST00000035307 CNN1P51911 297 aaKnown RBP10.06□□□□□ -0.8
CHPF2-201ENST00000035307 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
CHPF2-201ENST00000035307 ZNRD1Q9P1U0 126 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 NUP210LQ5VU65 1888 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 IGKV1-6A0A0C4DH72 117 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 LINC00469Q8N7U9 141 aa10.06□□□□□ -0.8
CHPF2-201ENST00000035307 WDR61Q9GZS3 305 aaKnown RBP10.06□□□□□ -0.8
CHPF2-201ENST00000035307 DUXBA0A1W2PPF3 345 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 DBX1A6NMT0 343 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 BPIFB3P59826 476 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 SERF2P84101 59 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 MMDQ15546 238 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 SEM1Q6ZVN7 128 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 NCKAP5O14513 1909 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 GRIFINA4D1Z8 144 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 J3KRW8 73 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 TCTAP57738 103 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 SPRNQ5BIV9 151 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 KIR3DL3Q8N743 410 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 G0S2P27469 103 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 ATP5G3P48201 142 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 ZNF137PP52743 207 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms