RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 TINAGL1Q9GZM7 467 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-231ENST00000641939 COA4Q9NYJ1 87 aa11.61□□□□□ -0.55
PHGDH-231ENST00000641939 EXTL2Q9UBQ6 330 aa11.61□□□□□ -0.55
PHGDH-231ENST00000641939 OVOL1O14753 267 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 MAS1LP35410 378 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 SLURP1P55000 103 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 DGCR2P98153 550 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 SPCS2Q15005 226 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 C10orf55Q5SWW7 151 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 AADACL3Q5VUY0 350 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 SSX9Q7RTT3 188 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 CD300LFQ8TDQ1 290 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 RAB2BQ8WUD1 216 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 SCOCQ9UIL1 159 aa11.6□□□□□ -0.55
PHGDH-231ENST00000641939 TPPPO94811 219 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 HPRT1P00492 218 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 NQO2P16083 231 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 RPL27AP46776 148 aaKnown RBP11.59□□□□□ -0.55
PHGDH-231ENST00000641939 RPL5P46777 297 aaKnown RBP11.59□□□□□ -0.55
PHGDH-231ENST00000641939 INSL3P51460 131 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 TAS2R31P59538 309 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 TSPAN5P62079 268 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 CMTM1Q8IZ96 169 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 DLX4Q92988 240 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-231ENST00000641939 USMG5Q96IX5 58 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 BCL7BQ9BQE9 202 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 FXYD6Q9H0Q3 95 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 BET1LQ9NYM9 111 aa11.59□□□□□ -0.55
PHGDH-231ENST00000641939 TEX22C9J3V5 150 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 GPR31O00270 319 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 PGLYRP1O75594 196 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-231ENST00000641939 RLN1P04808 185 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 TMBIM6P55061 237 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 RPL8P62917 257 aaKnown RBP11.58□□□□□ -0.56
PHGDH-231ENST00000641939 DEFA5Q01523 94 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 POU2AF1Q16633 256 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 RNASE12Q5GAN4 147 aaKnown RBP11.58□□□□□ -0.56
PHGDH-231ENST00000641939 OR4A47Q6IF82 309 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 SLC25A42Q86VD7 318 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 TTC9CQ8N5M4 171 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 OR4A5Q8NH83 315 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 C15orf40Q8WUR7 153 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 PLEKHA2Q9HB19 425 aa11.58□□□□□ -0.56
PHGDH-231ENST00000641939 RANGRFQ9HD47 186 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-231ENST00000641939 ANKRD34BA5PLL1 514 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 HMX3A6NHT5 357 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 E7EUB6 86 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 RGS5O15539 181 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 RBMXL2O75526 392 aaKnown RBP11.57□□□□□ -0.56
PHGDH-231ENST00000641939 IL6RP08887 468 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-231ENST00000641939 HLA-GP17693 338 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 ECI1P42126 302 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 DEFB121Q5J5C9 76 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 VAX1Q5SQQ9 334 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 LPCAT3Q6P1A2 487 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 ZNF429Q86V71 674 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 LAX1Q8IWV1 398 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 OR52I2Q8NH67 350 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 FYTTD1Q96QD9 318 aaKnown RBP11.57□□□□□ -0.56
PHGDH-231ENST00000641939 ABHD1Q96SE0 405 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 MIXL1Q9H2W2 232 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 HRASLSQ9HDD0 168 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 COMMD9Q9P000 198 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 KLK11Q9UBX7 282 aa11.57□□□□□ -0.56
PHGDH-231ENST00000641939 TRBV9A0A0B4J1U6 114 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 DPPA5A6NC42 116 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 FAM223BA6NKX1 122 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 CTDSP2O14595 271 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 NOL3O60936 208 aaKnown RBP11.56□□□□□ -0.56
PHGDH-231ENST00000641939 SAP30O75446 220 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 S1PR2O95136 353 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 PRH1P02810 166 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 ZNF735P0CB33 412 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 ZP3P21754 424 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 F2RP25116 425 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 S100GP29377 79 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 RHOGP84095 191 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 ZNF45Q02386 682 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 DCTN2Q13561 401 aaKnown RBP11.56□□□□□ -0.56
PHGDH-231ENST00000641939 ZNF343Q6P1L6 599 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 ACSM6Q6P461 480 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 FAM223AQ8IWN6 122 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 DMBX1Q8NFW5 382 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 DYNC2LI1Q8TCX1 351 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 DGCR14Q96DF8 476 aaKnown RBP11.56□□□□□ -0.56
PHGDH-231ENST00000641939 AKIP1Q9NQ31 210 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 SLC2A9Q9NRM0 540 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 CCDC59Q9P031 241 aaKnown RBP11.56□□□□□ -0.56
PHGDH-231ENST00000641939 MTFP1Q9UDX5 166 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 ZNF257Q9Y2Q1 563 aa11.56□□□□□ -0.56
PHGDH-231ENST00000641939 A0A1B0GW64 132 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 NPIPB5A8MRT5 1133 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 M0QYG6 137 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 UPK2O00526 184 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 TBPP20226 339 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 UCP3P55916 312 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 ERVK-16P61578 105 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 ATP5G2Q06055 141 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 PHLDA2Q53GA4 152 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 NECAP1Q8NC96 275 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms