RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	PYDC1	Q8WXC3	89 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	FGGY	Q96C11	551 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	ADAT3	Q96EY9	351 aa	Predicted RBP	4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	CLCC1	Q96S66	551 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	NKX3-1	Q99801	234 aa	Predicted RBP	4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	NAA50	Q9GZZ1	169 aa	Known RBP	4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	TMEM133	Q9H2Q1	129 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	HMG20A	Q9NP66	347 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	EXOSC1	Q9Y3B2	195 aa	Known RBP	4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	GMPPB	Q9Y5P6	360 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	IGKV1-27	A0A075B6S5	117 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	IGHV2-26	A0A0B4J1V2	119 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	IRGM	A1A4Y4	181 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	OOSP1	A8MZH6	123 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523		J3QRE1	110 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523		M0QZK8	103 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	GPX5	O75715	221 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	CD2	P06729	351 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	KRTAP10-3	P60369	221 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	PITPNA	Q00169	270 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	MED21	Q13503	144 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	HEPN1	Q6WQI6	88 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	CBR4	Q8N4T8	237 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	MS4A15	Q8N5U1	240 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523		Q8N9P0	234 aa	Predicted RBP	4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	NECAP1	Q8NC96	275 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	OR5AK2	Q8NH90	309 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	RDH12	Q96NR8	316 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	RETN	Q9HD89	108 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	RBFOX1	Q9NWB1	397 aa	Known RBP	4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	DPM3	Q9P2X0	92 aa		4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	RPL36	Q9Y3U8	105 aa	Known RBP	4.91	□□□□□ -1.62
CASC19-238	ENST00000641523	PRKDC	P78527	4128 aa	Known RBP	4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	TET2	Q6N021	2002 aa	Predicted RBP	4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	IGKV1-9	A0A0C4DH69	117 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	TMEM213	A2RRL7	107 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523		A6NDX4	124 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	OR4C45	A6NMZ5	311 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	LEUTX	A8MZ59	168 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523		H3BSH0	61 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523		J3QLW9	94 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	HCK	P08631	526 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	CD3G	P09693	182 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	ZNF19	P17023	458 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	RAB3A	P20336	220 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	BCL3	P20749	454 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	HLA-DMA	P28067	261 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	RPEL1	Q2QD12	228 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	PAN3	Q58A45	887 aa	Known RBP	4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	NDUFA11	Q86Y39	141 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	RDH10	Q8IZV5	341 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	BAALC	Q8WXS3	180 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	NIPSNAP3B	Q9BS92	247 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	CHST6	Q9GZX3	395 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	C8orf4	Q9NR00	106 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.9	□□□□□ -1.63
CASC19-238	ENST00000641523		V9GYY9	64 aa		4.9	□□□□□ -1.63
CASC19-238	ENST00000641523		A0A087WZ39	114 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523		A0A1B0GUV1	79 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	ODAM	A1E959	279 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	ZNF729	A6NN14	1252 aa	Predicted RBP	4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	DEGS1	O15121	323 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	BUB3	O43684	328 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	OR2H2	O95918	312 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	IGHG4	P01861	327 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	CTXN2	P0C2S0	81 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	GATA1	P15976	413 aa	Predicted RBP	4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	MGMT	P16455	207 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	CDK2	P24941	298 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	CD34	P28906	385 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	VDAC2	P45880	294 aa	Predicted RBP	4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	CBX5	P45973	191 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	PPP3R1	P63098	170 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	ARL16	Q0P5N6	197 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	KISS1	Q15726	138 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	CCDC58	Q4VC31	144 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	LPCAT4	Q643R3	524 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	TCF23	Q7RTU1	214 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	AKAP14	Q86UN6	197 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	CMTM1	Q8IZ96	169 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	ABHD12	Q8N2K0	398 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	TPRX1	Q8N7U7	411 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	ZNF555	Q8NEP9	628 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	PXT1	Q8NFP0	134 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	OR10V1	Q8NGI7	309 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	RHOXF1	Q8NHV9	184 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	ENKUR	Q8TC29	256 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	PIFO	Q8TCI5	191 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	STMN2	Q93045	179 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	GPER1	Q99527	375 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	BARHL1	Q9BZE3	327 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	ZNF702P	Q9H963	129 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	MRPS28	Q9Y2Q9	187 aa	Known RBP	4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	HILPDA	Q9Y5L2	63 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	KIAA2026	Q5HYC2	2103 aa		4.89	□□□□□ -1.63
CASC19-238	ENST00000641523	LOC100130705	A0A1B0GUX0	176 aa		4.88	□□□□□ -1.63
CASC19-238	ENST00000641523	ZNF780A	O75290	641 aa	Predicted RBP	4.88	□□□□□ -1.63
CASC19-238	ENST00000641523	HLA-G	P17693	338 aa		4.88	□□□□□ -1.63
CASC19-238	ENST00000641523	MYL12A	P19105	171 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms