RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 TMEM256Q8N2U0 113 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 ZNF664Q8N3J9 261 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 YLPM1P49750 1951 aaKnown RBP12.11□□□□□ -0.47
SCARB2-221ENST00000640341 MDFIC2A0A1B0GVS7 189 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 M0R1B8 84 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 SLC17A3O00476 420 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 P0C879 139 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 WDR31Q8NA23 367 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 ZDHHC11Q9H8X9 412 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 HES4Q9HCC6 221 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 C19orf67A6NJJ6 358 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 F6UZH7 168 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 DVL1O14640 695 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 RBFOX2O43251 390 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCARB2-221ENST00000640341 SP9P0CG40 484 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 DUX4L9Q6RFH8 374 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-221ENST00000640341 TREML4Q6UXN2 200 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 Q8TCH9 128 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 ANAPC16Q96DE5 110 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 TMEM140Q9NV12 185 aa12.11□□□□□ -0.47
SCARB2-221ENST00000640341 DBX2Q6ZNG2 339 aa12.1□□□□□ -0.47
SCARB2-221ENST00000640341 LYG1Q8N1E2 194 aa12.1□□□□□ -0.47
SCARB2-221ENST00000640341 SEPSECSQ9HD40 501 aaKnown RBP12.1□□□□□ -0.47
SCARB2-221ENST00000640341 ZNRD1Q9P1U0 126 aa12.1□□□□□ -0.47
SCARB2-221ENST00000640341 FOSL1P15407 271 aa12.1□□□□□ -0.47
SCARB2-221ENST00000640341 NDUFB7P17568 137 aa12.1□□□□□ -0.47
SCARB2-221ENST00000640341 KITLGP21583 273 aa12.1□□□□□ -0.47
SCARB2-221ENST00000640341 JOSD1Q15040 202 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-221ENST00000640341 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
SCARB2-221ENST00000640341 WDR83OSQ9Y284 106 aa12.1□□□□□ -0.47
SCARB2-221ENST00000640341 IGKV1D-17A0A075B6S4 117 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 ZNF705FA8MVS1 300 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-221ENST00000640341 OR4A8P0C604 315 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 ZNF705DP0CH99 300 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-221ENST00000640341 ZNF705BP0CI00 300 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-221ENST00000640341 GATA2P23769 480 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-221ENST00000640341 CNN1P51911 297 aaKnown RBP12.09□□□□□ -0.47
SCARB2-221ENST00000640341 SLC35B1P78383 322 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 MORN2Q502X0 79 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 TMEM18Q96B42 140 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 TRBV20OR9-2A0A075B6H5 130 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 IGHV2OR16-5A0A0B4J2B6 119 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 FOXH1O75593 365 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 OR4P4Q8NGL7 312 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 TMEM170AQ8WVE7 144 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 MISP3Q96FF7 219 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 MGST2Q99735 147 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 PARD6GQ9BYG4 376 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-221ENST00000640341 GCM1Q9NP62 436 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 CLCF1Q9UBD9 225 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 KMT2EQ8IZD2 1858 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 IGHV1-18A0A0C4DH31 117 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 HPRT1P00492 218 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 WNT2P09544 360 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 EIF4EBP1Q13541 118 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-221ENST00000640341 ACSF3Q4G176 576 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-221ENST00000640341 CENPVQ7Z7K6 275 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-221ENST00000640341 MOB3BQ86TA1 216 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 LRFN3Q9BTN0 628 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 ACACAQ13085 2346 aa12.09□□□□□ -0.47
SCARB2-221ENST00000640341 MUC6Q6W4X9 2439 aa12.08□□□□□ -0.47
SCARB2-221ENST00000640341 IGKV3-15P01624 115 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 CBLN1P23435 193 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 ZNF90Q03938 601 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 MSMPQ1L6U9 139 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 ENY2Q9NPA8 101 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 C15orf65H3BRN8 121 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 ASPHD1Q5U4P2 390 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 C1orf229Q6ZS94 237 aaPredicted RBP12.08□□□□□ -0.48
SCARB2-221ENST00000640341 SFRP2Q96HF1 295 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 LURAP1Q96LR2 239 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 TCF19Q9Y242 345 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 TP53TG5Q9Y2B4 290 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 NUPR1O60356 82 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 OR5I1Q13606 314 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 REC114Q7Z4M0 266 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 FAM216AQ8WUB2 273 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 RND1Q92730 232 aa12.08□□□□□ -0.48
SCARB2-221ENST00000640341 J3QW42 95 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 PDE6DO43924 150 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 ADH4P08319 380 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 SPCS3P61009 180 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 DEFB109BQ30KR1 87 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 TGIF2LYQ8IUE0 185 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 DMRTC2Q8IXT2 367 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-221ENST00000640341 OCC1Q8TAD7 63 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 ATG101Q9BSB4 218 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 GGTLC1Q9BX51 225 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
SCARB2-221ENST00000640341 SPAARA0A1B0GVQ0 90 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 ZNF883P0CG24 379 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 RPL31P62899 125 aaKnown RBP12.07□□□□□ -0.48
SCARB2-221ENST00000640341 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 Q8N7P7 452 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 PYGO2Q9BRQ0 406 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 YTHDF2Q9Y5A9 579 aaKnown RBP12.07□□□□□ -0.48
SCARB2-221ENST00000640341 GFRA3O60609 400 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 RPP30P78346 268 aaKnown RBP12.07□□□□□ -0.48
SCARB2-221ENST00000640341 PAX5Q02548 391 aa12.07□□□□□ -0.48
SCARB2-221ENST00000640341 GCSAMQ8N6F7 178 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms