RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 NSG2Q9Y328 171 aa10.92□□□□□ -0.66
HLA-C-210ENST00000640219 LSM4Q9Y4Z0 139 aaKnown RBP10.92□□□□□ -0.66
HLA-C-210ENST00000640219 hADV38S2A0JD32 116 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 ODAMA1E959 279 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 TMEM218A2RU14 115 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 A6NDX4 124 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 ODF3BA8MYP8 253 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 GEMIN2O14893 280 aaKnown RBP10.91□□□□□ -0.66
HLA-C-210ENST00000640219 GAPDHP04406 335 aaKnown RBP10.91□□□□□ -0.66
HLA-C-210ENST00000640219 FCGR2CP31995 323 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 RBM11P57052 281 aaKnown RBP10.91□□□□□ -0.66
HLA-C-210ENST00000640219 BLCAPP62952 87 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 SRSF7Q16629 238 aaKnown RBP eCLIP10.91□□□□□ -0.66
HLA-C-210ENST00000640219 LTC4SQ16873 150 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 PXDC1Q5TGL8 231 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 GGNBP1Q5YKI7 109 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 CENPVQ7Z7K6 275 aaPredicted RBP10.91□□□□□ -0.66
HLA-C-210ENST00000640219 OR13A1Q8NGR1 328 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 TMED6Q8WW62 240 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 LEAP2Q969E1 77 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 TOMM40LQ969M1 308 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 RRNAD1Q96FB5 475 aaKnown RBP10.91□□□□□ -0.66
HLA-C-210ENST00000640219 GALNT14Q96FL9 552 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 SULT4A1Q9BR01 284 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 MCRIP2Q9BUT9 160 aaKnown RBP10.91□□□□□ -0.66
HLA-C-210ENST00000640219 NKX6-2Q9C056 277 aaPredicted RBP10.91□□□□□ -0.66
HLA-C-210ENST00000640219 SLC5A7Q9GZV3 580 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 TAF9BQ9HBM6 251 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 TREM1Q9NP99 234 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 LINC00312Q9Y6C7 94 aa10.91□□□□□ -0.66
HLA-C-210ENST00000640219 DNAH7Q8WXX0 4024 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 IGKV1D-8A0A087WSZ0 117 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 IGHV2-26A0A0B4J1V2 119 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 A0A1W2PPH5 198 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 DEDDO75618 318 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 CTXN2P0C2S0 81 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 S100GP29377 79 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 LGALS4P56470 323 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 FXYD4P59646 89 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 MEF2CQ06413 473 aaPredicted RBP10.9□□□□□ -0.66
HLA-C-210ENST00000640219 PJVKQ0ZLH3 352 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 SSX2Q16385 188 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 C17orf58Q2M2W7 97 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 KHDC1LQ5JSQ8 128 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 FAM122CQ6P4D5 195 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 C5orf24Q7Z6I8 188 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 FOXRED2Q8IWF2 684 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 MRPL41Q8IXM3 137 aaKnown RBP10.9□□□□□ -0.66
HLA-C-210ENST00000640219 SPAG16Q8N0X2 631 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 LRTM2Q8N967 370 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 ZNF565Q8N9K5 539 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 SUMF2Q8NBJ7 301 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 RTN4IP1Q8WWV3 396 aaPredicted RBP10.9□□□□□ -0.66
HLA-C-210ENST00000640219 MOB3AQ96BX8 217 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 HDHD3Q9BSH5 251 aaPredicted RBP10.9□□□□□ -0.66
HLA-C-210ENST00000640219 RIMS4Q9H426 269 aaPredicted RBP10.9□□□□□ -0.66
HLA-C-210ENST00000640219 PRR13Q9NZ81 148 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 PITPNC1Q9UKF7 332 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 LSM5Q9Y4Y9 91 aaKnown RBP10.9□□□□□ -0.66
HLA-C-210ENST00000640219 HILPDAQ9Y5L2 63 aa10.9□□□□□ -0.66
HLA-C-210ENST00000640219 F8W036 122 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 OR7C1O76099 320 aaPredicted RBP10.89□□□□□ -0.67
HLA-C-210ENST00000640219 SCGB1D2O95969 90 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 CD24P25063 80 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 IL13RA2Q14627 380 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 TMEM187Q14656 261 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 MPV17LQ2QL34 196 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 LINC00596Q86U02 117 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 RFESDQ8TAC1 157 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 MRGPRDQ8TDS7 321 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 RBMXL1Q96E39 390 aaKnown RBP10.89□□□□□ -0.67
HLA-C-210ENST00000640219 SPIN2AQ99865 258 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 SPIN2BQ9BPZ2 258 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 RSRP1Q9BUV0 290 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 SEBOXQ9HB31 216 aaPredicted RBP10.89□□□□□ -0.67
HLA-C-210ENST00000640219 SPACA1Q9HBV2 294 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 TMED3Q9Y3Q3 217 aa10.89□□□□□ -0.67
HLA-C-210ENST00000640219 TRGV10A0A0A0MS01 117 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 RAMP3O60896 148 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 ATG12O94817 140 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 SNAPINO95295 136 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 PVALBP20472 110 aaPredicted RBP10.88□□□□□ -0.67
HLA-C-210ENST00000640219 NFYBP25208 207 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 SSTR5P35346 364 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 SULT1A2P50226 295 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 GNMTQ14749 295 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 KIR2DS1Q14954 304 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 ZFAND6Q6FIF0 208 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 Q6ZS49 121 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 COMMD1Q8N668 190 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 OR4X2Q8NGF9 303 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 OR4P4Q8NGL7 312 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 OR13D1Q8NGV5 346 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 RCHY1Q96PM5 261 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 TMEM133Q9H2Q1 129 aa10.88□□□□□ -0.67
HLA-C-210ENST00000640219 FAM212BQ9NTI7 297 aaPredicted RBP10.88□□□□□ -0.67
HLA-C-210ENST00000640219 hCG_1809904A0A1W2PP81 198 aa10.87□□□□□ -0.67
HLA-C-210ENST00000640219 A0A1W2PPE2 198 aa10.87□□□□□ -0.67
HLA-C-210ENST00000640219 A0A1W2PPE3 182 aa10.87□□□□□ -0.67
HLA-C-210ENST00000640219 A0A1W2PR64 198 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms