RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 CFPP27918 469 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 FHL1Q13642 323 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 CXorf66Q5JRM2 361 aaPredicted RBP4.83□□□□□ -1.64
SCARB2-218ENST00000639715 DNM1P46Q6ZS02 220 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 SSX8Q7RTT4 187 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 OR5AS1Q8N127 324 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 OR8B2Q96RD0 313 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 SRSF8Q9BRL6 282 aaKnown RBP4.83□□□□□ -1.64
SCARB2-218ENST00000639715 MRPL13Q9BYD1 178 aaKnown RBP4.83□□□□□ -1.64
SCARB2-218ENST00000639715 GPR27Q9NS67 375 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 UFC1Q9Y3C8 167 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 FREM3P0C091 2139 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 AHCTF1Q8WYP5 2266 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 IGLV3-32A0A0A0MS00 114 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM30CPA0ZSE6 113 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 H3BMH7 237 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 PATE4P0C8F1 98 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 LTBRP36941 435 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 RBM11P57052 281 aaKnown RBP4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TCTAP57738 103 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 SPEM2Q0P670 501 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TIGITQ495A1 244 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 FAM166AQ6J272 317 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM45BQ96B21 275 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 GALMQ96C23 342 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 GMPPAQ96IJ6 420 aaPredicted RBP4.83□□□□□ -1.64
SCARB2-218ENST00000639715 KCNS1Q96KK3 526 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 Q96M66 194 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 ZNF257Q9Y2Q1 563 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 IGHV1-45A0A0A0MS14 117 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TRAV8-6A0A0B4J262 113 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TEX50A0A1B0GTY4 177 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 CRYM-AS1A6NIL9 109 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 VENTXO95231 258 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 APCSP02743 223 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 MT-ND6P03923 174 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 CCL4P13236 92 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TBC1D26Q86UD7 250 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TUSC5Q8IXB3 177 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 NFAM1Q8NET5 270 aaPredicted RBP4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TAAR6Q96RI8 345 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM70Q9BUB7 260 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TM2D1Q9BX74 207 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 DEFB127Q9H1M4 99 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 GNB4Q9HAV0 340 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 YAE1D1Q9NRH1 226 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 CYSLTR1Q9Y271 337 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 A0A0G2JLM5 398 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 PROB1E7EW31 1015 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TAX1BP3O14907 124 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 ACTL6BO94805 426 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 RHOGP84095 191 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 SERF2P84101 59 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 GAGE5Q13069 117 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 GAGE6Q13070 117 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 ODF1Q14990 250 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 PDCD1Q15116 288 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 IGFBP7Q16270 282 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 ZNF718Q3SXZ3 478 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 COX19Q49B96 90 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 OR4A5Q8NH83 315 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM54Q969K7 222 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 PYGO2Q9BRQ0 406 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 RTN4RQ9BZR6 473 aa4.83□□□□□ -1.64
SCARB2-218ENST00000639715 MRPL16Q9NX20 251 aaKnown RBP4.83□□□□□ -1.64
SCARB2-218ENST00000639715 RALGAPA1Q6GYQ0 2036 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 NOTCH4Q99466 2003 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 ZNF106Q9H2Y7 1883 aaKnown RBP4.82□□□□□ -1.64
SCARB2-218ENST00000639715 TRBV7-9A0A0J9YWB2 115 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 C17orf51A8MQB3 221 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 TMEM97Q5BJF2 176 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 PMS2CLQ68D20 193 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 VSTM2AQ8TAG5 236 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 SAP25Q8TEE9 199 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 SCRT1Q9BWW7 348 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 MAP1LC3CQ9BXW4 147 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-218ENST00000639715 ABCA7Q8IZY2 2146 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 TRGV5A0A0B4J1U4 118 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 IGKV1D-43A0A0B4J1Z2 117 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 A0A1B0GWB2 263 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 IGLC1P0CG04 106 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 CAMPP49913 170 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 SEC11AP67812 179 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 PSG4Q00888 419 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 HIST1H1AQ02539 215 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-218ENST00000639715 PIGYQ3MUY2 71 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 DEFB125Q8N687 156 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 C5orf30Q96GV9 206 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 CLEC7AQ9BXN2 247 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 KBTBD11-OT1A0A1B0GTJ5 212 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 CTXND1A0A1B0GTU2 59 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 TEX48A0A1B0GUV7 120 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 A0A1W2PQM1 296 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 HELTA6NFD8 242 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 C21orf140B9A014 251 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 GALR2O43603 387 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-218ENST00000639715 C1QTNF9P0C862 333 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 SMIM17P0DL12 118 aa4.82□□□□□ -1.64
SCARB2-218ENST00000639715 IGLL1P15814 213 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms